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The map label for this gene is yubP

Identifier: 218692903

GI number: 218692903

Start: 92266

End: 93171

Strand: Reverse

Name: yubP

Synonym: p1ECUMN_0118

Alternate gene names: 218692903

Gene position: 93171-92266 (Counterclockwise)

Preceding gene: 218692904

Following gene: 218692901

Centisome position: 76.18

GC content: 43.05

Gene sequence:

>906_bases
ATGTTGTTAATGGGGATCGGGAGGGATGATATTAAGCGGAAAAATTTTTTATTAAATTTATTCTTTCATAAAGGAGTAGC
TGTTATGCGATTAGCTTCCCGTTTTGGTCGGTATAATTCCATCCGCCGTGAACGTCCTTTAACGGATGATGAATTAATGC
AGTTCGTGCCTTCGGTATTTTCCGGTGATAAACATGAGTCCCGGAGTGAACGTTATACGTATATTCCAACAATCAATATC
ATCAATAAGTTACGTGATGAAGGTTTCCAGCCATTCTTTGCCTGTCAGAGTCGGGTTCGTGATTTGGGACGCCGAGAATA
CAGTAAACATATGTTACGTCTTCGCAGGGAAGGGAATATTAACGGGCAGGAAGTTCCTGAAATTATCCTGCTTAATTCAC
ATGATGGTTCATCCAGTTATCAGATGATCCCCGGAATTTTTCGTTTTGTCTGCACAAATGGCCTGGTGTGCGGAAATAAT
TTTGGCGAAATCCGCGTTCCACATAAAGGTGATATTGTCGGGCAGGTTATCGAGGGAGCGTATGAAGTGCTCGGTGTCTT
TGATAAGGTCACTGATAATATGGAGGCGATGAAAGAAATTCATCTTAACAGTGACGAGCAACATTTATTTGGCAGAGCTG
CACTGATGGTCAGGTATGAAGATGAAAATAAAACGCCAGTGACGCCTGAACAAATAATTACTCCCCGTCGTCGGGAAGAT
AAACAGAACGATCTCTGGACAACCTGTCAGCGGGTTCAGGAGAATATGATAAAAGGTGGATTGTCGGGGCGAAGTGCCTC
CGGTAAAAATACCAGGACAAGAGCCATTACAGGTATTGATGGTGATATCCGAATCAACAAGGCGTTATGGGTGATTGCCG
AACAGTTCAGAAAGTGGAAGTCATGA

Upstream 100 bases:

>100_bases
GATCACTTCAAACAGTTCCTGCGTCAGATTAAGCGTGCCGGCCTCGATATCCGGGCGATCTGCTGACCGGATGTGATGAA
TATCCCTCCTGATTGTTGCA

Downstream 100 bases:

>100_bases
TAATATAAGTAAAGCCCCGAAAATTTTTCGGGGCTTTACTTATATTATCATTCTTCGGCATCGCTGTGTCGTCTGATATA
CCTCAATTCCATCAATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLLMGIGRDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINI
INKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGNINGQEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNN
FGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRRED
KQNDLWTTCQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWKS

Sequences:

>Translated_301_residues
MLLMGIGRDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINI
INKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGNINGQEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNN
FGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRRED
KQNDLWTTCQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWKS
>Mature_301_residues
MLLMGIGRDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINI
INKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGNINGQEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNN
FGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRRED
KQNDLWTTCQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=267, Percent_Identity=66.2921348314607, Blast_Score=380, Evalue=1e-107,
Organism=Escherichia coli, GI87081705, Length=269, Percent_Identity=66.1710037174721, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 34727; Mature: 34727

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLMGIGRDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVF
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SGDKHESRSERYTYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGNI
CCCCCCCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGQEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGA
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCCEECCCCCCHHHHHHHHH
YEVLGVFDKVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRRED
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCEEEEEEEEECCCCCCCCHHHHCCCCCCCC
KQNDLWTTCQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHC
S
C
>Mature Secondary Structure
MLLMGIGRDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVF
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SGDKHESRSERYTYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGNI
CCCCCCCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGQEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGA
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCCEECCCCCCHHHHHHHHH
YEVLGVFDKVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRRED
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCEEEEEEEEECCCCCCCCHHHHCCCCCCCC
KQNDLWTTCQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]