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The map label for this gene is traV

Identifier: 218692888

GI number: 218692888

Start: 83161

End: 83676

Strand: Reverse

Name: traV

Synonym: p1ECUMN_0103

Alternate gene names: 218692888

Gene position: 83676-83161 (Counterclockwise)

Preceding gene: 218692889

Following gene: 218692887

Centisome position: 68.42

GC content: 53.1

Gene sequence:

>516_bases
ATGAAACAGATTTCTTTATTTATTCCTCTGCTGGGGACCTTATTACTTTCCGGCTGTGCCGGAACCAGTACGGAATTTGA
GTGTAACGCCACCACATCCGATACCTGTATGACGATGGAGCAGGCCAATGAGAAGGCCAAAAAGCTGGAGCAGCCTGCAG
ATGCAAAGCCGGCTGCGGCATCACTGCCGCGCCTGGCTGAAGGGAACTTCCGGACAACCACGGTGCGGGCCGTCACCGCG
GCCAGCCCATCTGGCCGCGGGCCTGTAGTGACTGCACTTCCGGAGCAGAAACTGCTGGCACCACGTCCGTTGTTTACGGC
TGCCCGGGAAGTGAAAACGATTATTCCGGTCAGTTCAGTTGCGTCGGTAACACCTCCCCGCCCGCTAAGAACGGGTGAGC
AGACGGCAGCATTATGGATAGCGCCTTATATTGATAATCAGGATGTTTATCATCAACCATCCAGTGTGTTTTTTGTTATT
AAACCGTCTGCGTGGGGAAAACCACGTATTAATTAA

Upstream 100 bases:

>100_bases
CACGGAATACGGTTTTTGAAAATCCTGACATTGTAAAAACCTGTACGGTCAGGGATTTGAAGAATGATTTTGTGAACTGC
GATGAGAAAGGTGAGGGACA

Downstream 100 bases:

>100_bases
CTGGCCCTGAAGTTGTATATCAGCCGGCAATGCCGGCGGGCTTTCTGTATTCAAAATCTGCCTGTAAAACGAGTGCCCTG
TGCGTGAAAAGGGATGGGCG

Product: conjugal transfer protein TraV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKQISLFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLEQPADAKPAAASLPRLAEGNFRTTTVRAVTA
ASPSGRGPVVTALPEQKLLAPRPLFTAAREVKTIIPVSSVASVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVI
KPSAWGKPRIN

Sequences:

>Translated_171_residues
MKQISLFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLEQPADAKPAAASLPRLAEGNFRTTTVRAVTA
ASPSGRGPVVTALPEQKLLAPRPLFTAAREVKTIIPVSSVASVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVI
KPSAWGKPRIN
>Mature_171_residues
MKQISLFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLEQPADAKPAAASLPRLAEGNFRTTTVRAVTA
ASPSGRGPVVTALPEQKLLAPRPLFTAAREVKTIIPVSSVASVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVI
KPSAWGKPRIN

Specific function: Involved in F pilus assembly. Appear to facilitate the polymerization of inner membrane-located pilin subunits into extracellular F pilus filaments [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014118 [H]

Pfam domain/function: PF09676 TraV [H]

EC number: NA

Molecular weight: Translated: 18304; Mature: 18304

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQISLFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLEQPADAKPAAA
CCCEEHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
SLPRLAEGNFRTTTVRAVTAASPSGRGPVVTALPEQKLLAPRPLFTAAREVKTIIPVSSV
CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHH
ASVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVIKPSAWGKPRIN
HCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKQISLFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLEQPADAKPAAA
CCCEEHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
SLPRLAEGNFRTTTVRAVTAASPSGRGPVVTALPEQKLLAPRPLFTAAREVKTIIPVSSV
CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHH
ASVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVIKPSAWGKPRIN
HCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8021201; 7915817 [H]