| Definition | Escherichia coli UMN026 plasmid p1ESCUM, complete sequence. |
|---|---|
| Accession | NC_011749 |
| Length | 122,301 |
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The map label for this gene is insA
Identifier: 218692847
GI number: 218692847
Start: 47193
End: 47468
Strand: Reverse
Name: insA
Synonym: p1ECUMN_0060
Alternate gene names: 218692847
Gene position: 47468-47193 (Counterclockwise)
Preceding gene: 218692848
Following gene: 218692846
Centisome position: 38.81
GC content: 53.26
Gene sequence:
>276_bases GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACA TCAGCGCTATCTCTGCTCTCACTGCCATAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACC AGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATT TTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA
Upstream 100 bases:
>100_bases TTTCACCAGTTTTGATTTAAACGTGGCCAATATGGACAACTTCTTGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT GGTGTTTTTGAGGTGCTCCA
Downstream 100 bases:
>100_bases CCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCG CGCCAGCGCTGGCTGTTTTA
Product: IS1 repressor protein InsA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCHKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTI FRHLKNSGRSR
Sequences:
>Translated_91_residues MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCHKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTI FRHLKNSGRSR >Mature_90_residues ASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCHKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIF RHLKNSGRSR
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI87081814, Length=91, Percent_Identity=98.9010989010989, Blast_Score=187, Evalue=8e-50, Organism=Escherichia coli, GI1786471, Length=91, Percent_Identity=98.9010989010989, Blast_Score=187, Evalue=8e-50, Organism=Escherichia coli, GI1786460, Length=91, Percent_Identity=98.9010989010989, Blast_Score=187, Evalue=8e-50, Organism=Escherichia coli, GI1789852, Length=91, Percent_Identity=97.8021978021978, Blast_Score=186, Evalue=3e-49, Organism=Escherichia coli, GI1788204, Length=91, Percent_Identity=97.8021978021978, Blast_Score=186, Evalue=3e-49, Organism=Escherichia coli, GI1786204, Length=91, Percent_Identity=97.8021978021978, Blast_Score=186, Evalue=3e-49, Organism=Escherichia coli, GI1790747, Length=91, Percent_Identity=90.1098901098901, Blast_Score=175, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012287 - InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 9883; Mature: 9752
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCHKTWQLQFTYTASQPGTHQKIIDMA CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHH MNGVGCRATARIMGVGLNTIFRHLKNSGRSR HCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCHKTWQLQFTYTASQPGTHQKIIDMA CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHH MNGVGCRATARIMGVGLNTIFRHLKNSGRSR HCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]