| Definition | Escherichia coli UMN026 plasmid p1ESCUM, complete sequence. |
|---|---|
| Accession | NC_011749 |
| Length | 122,301 |
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The map label for this gene is 218692813
Identifier: 218692813
GI number: 218692813
Start: 23345
End: 23605
Strand: Reverse
Name: 218692813
Synonym: p1ECUMN_0023
Alternate gene names: NA
Gene position: 23605-23345 (Counterclockwise)
Preceding gene: 218692814
Following gene: 218692812
Centisome position: 19.3
GC content: 53.26
Gene sequence:
>261_bases ATGACGCGCAAATGGGCTTACAGGGCGATTCGTCAGGGCTGGCCCGAATTCTCACAGTGGCTTGATGCCGTGATTCAGCG TGTCGAAATGTACAACGCATCGCTTCCCGTTCCGCTTTCACCGCCTGAATGTCGGGCTATTGGCAAGAGCATTGCGAAAT ACACGCACAGGAACTTCACGCCGGAAACTTTCGCACAGTATGTGGCTGATACGCACACATTAACGTACGTTTTCGTTCCA TTGGCCCTCACCCCCCGATAA
Upstream 100 bases:
>100_bases AGTGGCGAGAGGAAGCCTATACCCTCGATGAACTGGCTGATTATCTCGATTTGAGCGCCTCAGCGCGCCGTAGCATCGAC GAAACTGCCACCTGTTCGAA
Downstream 100 bases:
>100_bases CGACCCAGGTAGCGCGCCGTATTCCCCCCGCCGGCCGTTTTCTTCGACATGTACATCAGGCGCGGAACTCATCGGGGCGC AGGAATGAAATCCCATTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Replication Initiation Protein A; Replication Protein
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTRKWAYRAIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSPPECRAIGKSIAKYTHRNFTPETFAQYVADTHTLTYVFVP LALTPR
Sequences:
>Translated_86_residues MTRKWAYRAIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSPPECRAIGKSIAKYTHRNFTPETFAQYVADTHTLTYVFVP LALTPR >Mature_85_residues TRKWAYRAIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSPPECRAIGKSIAKYTHRNFTPETFAQYVADTHTLTYVFVPL ALTPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10001; Mature: 9869
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKWAYRAIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSPPECRAIGKSIAKYTHRNFT CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC PETFAQYVADTHTLTYVFVPLALTPR HHHHHHHHHHHHHHHHHHEEHHCCCC >Mature Secondary Structure TRKWAYRAIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSPPECRAIGKSIAKYTHRNFT CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC PETFAQYVADTHTLTYVFVPLALTPR HHHHHHHHHHHHHHHHHHEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA