Definition Escherichia coli UMN026 plasmid p1ESCUM, complete sequence.
Accession NC_011749
Length 122,301

Click here to switch to the map view.

The map label for this gene is 218692812

Identifier: 218692812

GI number: 218692812

Start: 22138

End: 23055

Strand: Reverse

Name: 218692812

Synonym: p1ECUMN_0022

Alternate gene names: NA

Gene position: 23055-22138 (Counterclockwise)

Preceding gene: 218692813

Following gene: 218692811

Centisome position: 18.85

GC content: 46.19

Gene sequence:

>918_bases
TTGTCAATAAATATATGGAAACATATTGTTTCAGATGGGAATATGAGAAAGTTCATCCTTATTTCTATGATAACGTTAGC
TAGTGTTAGTCTGGGAGCCTGCAGACAGAATGTCACCATAAAGCAGGATGCGCCAGGGCAGAAAGCTTTCCTGACTGACG
GGCAGATTTACGATTTGCACAGTGGCAAAATTATTTCTAGCAGCGAGCTTTTGGCGGATCTTGCTACCGCTCAACATCTT
ATTATTGGTGAAAAACACGATAATGCCGAGCATCATCAGATTGAGCTTTGGCTTATTCAAAATTTGCTCATCCAGCGACC
ACAGGGGAGTGTGTTGCTTGAGATGTTGACGTCAGAGCAACAGCCCCGAGTTAACCAAGTTAAATGTTGGCTGAAAGATA
ATCCTGTGGTTCGAGATAGCCGTGTTCAGGAACTACTTAACTGGCAAAAAGGGTGGTCCTGGGAGATGTATGGCGACATC
GTCATGCAGCTATTACGTGGGCCTTACCCGCTGCTCAATGCCAACATTGGCCGGGAGCAGATATTGGCACTGTACAAAAA
AAACGAATTTCCTAAAGGAAAAAAATCCACTGCACCTGTGGTACAAGAAGCTCTGCGTGAAACCATCATATCTATGCATG
AAGGCAACCTTGAAAGCCAGCAACTGACGTCAATGCTCTCTATTCAGCAGCAGCGGGATCGCTACATGGCCCGCCAGCTT
CTGAGTGCCCCGGTACCGTCGTTGTTGATTGCAGGTGGTTATCACGCGTCAAAAAGCATGGGCGTACCGTTACACATGGA
AGATCTTGCCACCGGCACCCATCCAGTGGTGTTGATGCTTGCAGAAAAAGGAATGAACATCACAGTAGATCATGCTGACT
ACGTGTGGTTTGTAGCGCCAGATACAACAAAAAGGTAA

Upstream 100 bases:

>100_bases
CATAATATCGGCTGGTAAACATCACTCGCTAGTGCATTCTTTTTGTTGGTAATGATAATCATTTACATTCATTCTTTGAT
GTTTTATCATAATTAATGTT

Downstream 100 bases:

>100_bases
ACCATGGATGATGAATATTCTCCACTTCTCACAGTCGGTAAAATGGAGCAGCTGGTTTATCTGTTCTCTACTGCTTCATG
GACTGATTTTCCTTGCGTTT

Product: iron-regulated protein cjrA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSINIWKHIVSDGNMRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLTDGQIYDLHSGKIISSSELLADLATAQHL
IIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEMLTSEQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDI
VMQLLRGPYPLLNANIGREQILALYKKNEFPKGKKSTAPVVQEALRETIISMHEGNLESQQLTSMLSIQQQRDRYMARQL
LSAPVPSLLIAGGYHASKSMGVPLHMEDLATGTHPVVLMLAEKGMNITVDHADYVWFVAPDTTKR

Sequences:

>Translated_305_residues
MSINIWKHIVSDGNMRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLTDGQIYDLHSGKIISSSELLADLATAQHL
IIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEMLTSEQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDI
VMQLLRGPYPLLNANIGREQILALYKKNEFPKGKKSTAPVVQEALRETIISMHEGNLESQQLTSMLSIQQQRDRYMARQL
LSAPVPSLLIAGGYHASKSMGVPLHMEDLATGTHPVVLMLAEKGMNITVDHADYVWFVAPDTTKR
>Mature_304_residues
SINIWKHIVSDGNMRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLTDGQIYDLHSGKIISSSELLADLATAQHLI
IGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEMLTSEQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIV
MQLLRGPYPLLNANIGREQILALYKKNEFPKGKKSTAPVVQEALRETIISMHEGNLESQQLTSMLSIQQQRDRYMARQLL
SAPVPSLLIAGGYHASKSMGVPLHMEDLATGTHPVVLMLAEKGMNITVDHADYVWFVAPDTTKR

Specific function: Unknown

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34404; Mature: 34273

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINIWKHIVSDGNMRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLTDGQIYDLH
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCEEEEEC
SGKIISSSELLADLATAQHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEMLTSEQ
CCCEECHHHHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHCCC
QPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNANIGREQ
CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCHHH
ILALYKKNEFPKGKKSTAPVVQEALRETIISMHEGNLESQQLTSMLSIQQQRDRYMARQL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LSAPVPSLLIAGGYHASKSMGVPLHMEDLATGTHPVVLMLAEKGMNITVDHADYVWFVAP
HHCCCCCEEEECCCCCCCCCCCCEEHHHHCCCCCCEEEEEECCCCEEEEECCCEEEEECC
DTTKR
CCCCC
>Mature Secondary Structure 
SINIWKHIVSDGNMRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLTDGQIYDLH
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCEEEEEC
SGKIISSSELLADLATAQHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEMLTSEQ
CCCEECHHHHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHCCC
QPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNANIGREQ
CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCHHH
ILALYKKNEFPKGKKSTAPVVQEALRETIISMHEGNLESQQLTSMLSIQQQRDRYMARQL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LSAPVPSLLIAGGYHASKSMGVPLHMEDLATGTHPVVLMLAEKGMNITVDHADYVWFVAP
HHCCCCCEEEECCCCCCCCCCCCEEHHHHCCCCCCEEEEEECCCCEEEEECCCEEEEECC
DTTKR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA