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The map label for this gene is stpA [C]

Identifier: 218698052

GI number: 218698052

Start: 4979387

End: 4980142

Strand: Reverse

Name: stpA [C]

Synonym: EC55989_4862

Alternate gene names: 218698052

Gene position: 4980142-4979387 (Counterclockwise)

Preceding gene: 218698053

Following gene: 218698051

Centisome position: 96.61

GC content: 49.87

Gene sequence:

>756_bases
TTGAGGCTTTCAGTGATGGCTGATATAGCAACAATGAGAATGAAGGCTCTGCACTTCTGGGATAAACACGGTATTTCTGC
GGCTTCTGAAGCCTTTGGCGTGTCCTGCCGCACGCTTTACTGGTGGCGTCAGTTACTGAACAAGGGAGGACCTGAGGGGC
TAATCCCGCACAGTAAGGCACCTCTGGTGCGACGAAAAAAGCACTGGCATCCCGATGTGCTGAAAGAGATTCGACGCCTC
AGGACAGAGCTGCCAAACCTCGGTAAAGAGCAGATTTTTGTTCGCCTGAAGCCCTGGTGCGCACAGCGCCATCTGACCTG
CCCGAGTGTTTCCACCATCGGCAGAATGATCGCCACCGCACACGATAAAATGCGGATGGTACCAGTACGTCTGAGCTCGC
GGGGTAAGGCTCTGCTTGTCAAAAAGCGAACCGCCAAACCCCACCGGCCAAAGCACTACCGTCTGGTAAAGACCGGTGAG
CTCATTGGGATGGACGCCATTGAGCTCAGAATGGGTGAAATGCGTCGCTATATCATTACCATGATCGACGAACGTGAATT
TGGCAAAAAATTACAGGCAGGCAGAAAAAGTGTGTCAGGAGGGCATAAATACAGATATGAGTATAACGGTCAAACAATGT
ACTGGAGTGGACAAGGTCGTCGGCCTAATGTTATTGCAGAAGCAATAAAAGCCGGAGGTTCTCTTGATGATTTTCTTATA
TCTCAGGATACATCATCTTGTTCTGATTATGAGTGA

Upstream 100 bases:

>100_bases
TTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATGCAGCATCTGATGGTTGGCTAT
CCTAAACGGCCGATTATGCG

Downstream 100 bases:

>100_bases
TACATCTAATCGGTTCAATGTCGCTGTAATGCTCGCATTTTGATGTTTATATGGCAGCGTTACCGTTCATTGTTTCAGTT
ACAAATTGATCGTCATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; Integrase Core Domain Protein; H-NS Histone Family Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRLSVMADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLNKGGPEGLIPHSKAPLVRRKKHWHPDVLKEIRRL
RTELPNLGKEQIFVRLKPWCAQRHLTCPSVSTIGRMIATAHDKMRMVPVRLSSRGKALLVKKRTAKPHRPKHYRLVKTGE
LIGMDAIELRMGEMRRYIITMIDEREFGKKLQAGRKSVSGGHKYRYEYNGQTMYWSGQGRRPNVIAEAIKAGGSLDDFLI
SQDTSSCSDYE

Sequences:

>Translated_251_residues
MRLSVMADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLNKGGPEGLIPHSKAPLVRRKKHWHPDVLKEIRRL
RTELPNLGKEQIFVRLKPWCAQRHLTCPSVSTIGRMIATAHDKMRMVPVRLSSRGKALLVKKRTAKPHRPKHYRLVKTGE
LIGMDAIELRMGEMRRYIITMIDEREFGKKLQAGRKSVSGGHKYRYEYNGQTMYWSGQGRRPNVIAEAIKAGGSLDDFLI
SQDTSSCSDYE
>Mature_251_residues
MRLSVMADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLNKGGPEGLIPHSKAPLVRRKKHWHPDVLKEIRRL
RTELPNLGKEQIFVRLKPWCAQRHLTCPSVSTIGRMIATAHDKMRMVPVRLSSRGKALLVKKRTAKPHRPKHYRLVKTGE
LIGMDAIELRMGEMRRYIITMIDEREFGKKLQAGRKSVSGGHKYRYEYNGQTMYWSGQGRRPNVIAEAIKAGGSLDDFLI
SQDTSSCSDYE

Specific function: It May Act In A Fashion Similar To H-Ns Proteins. [C]

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28857; Mature: 28857

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSVMADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLNKGGPEGLIPHSKA
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PLVRRKKHWHPDVLKEIRRLRTELPNLGKEQIFVRLKPWCAQRHLTCPSVSTIGRMIATA
CHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHH
HDKMRMVPVRLSSRGKALLVKKRTAKPHRPKHYRLVKTGELIGMDAIELRMGEMRRYIIT
HHHHEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCEECCHHHHHHHHHHHHHHHH
MIDEREFGKKLQAGRKSVSGGHKYRYEYNGQTMYWSGQGRRPNVIAEAIKAGGSLDDFLI
HHCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHCCCCHHHHEE
SQDTSSCSDYE
ECCCCCCCCCC
>Mature Secondary Structure
MRLSVMADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLNKGGPEGLIPHSKA
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PLVRRKKHWHPDVLKEIRRLRTELPNLGKEQIFVRLKPWCAQRHLTCPSVSTIGRMIATA
CHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHH
HDKMRMVPVRLSSRGKALLVKKRTAKPHRPKHYRLVKTGELIGMDAIELRMGEMRRYIIT
HHHHEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCEECCHHHHHHHHHHHHHHHH
MIDEREFGKKLQAGRKSVSGGHKYRYEYNGQTMYWSGQGRRPNVIAEAIKAGGSLDDFLI
HHCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHCCCCHHHHEE
SQDTSSCSDYE
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA