Click here to switch to the map view.

The map label for this gene is yjfZ

Identifier: 218697955

GI number: 218697955

Start: 4872788

End: 4873582

Strand: Reverse

Name: yjfZ

Synonym: EC55989_4762

Alternate gene names: 218697955

Gene position: 4873582-4872788 (Counterclockwise)

Preceding gene: 218697957

Following gene: 218697950

Centisome position: 94.54

GC content: 41.64

Gene sequence:

>795_bases
ATGACATTACCAACGACTATTTATTCATTTCCTGCATATTCACCCCATTTTTCGTCCACCGACAAACCAGTAAAATTAAA
ATTTCATCAATATGCACGTGCTACATTACTGCCAAATCGTGGAAGAGATCATAATTGCGATGGCAGACGTACTGTTGAGA
TCCACAAACTAGATCTCTCTGACTGGCAAGCATTCAATAAGTTAGCAACGAAGTGTAATGCTTACGATGGAGTAACAATG
AATGGTGATAATTCTTTTGGATGGAACCATGAAGCTACATTAGATAATATTCACGCCCAGAAATACAATAAAGCTTACGC
GGGTGCGAGGTTAACCGCAGAACTGAAATATTTATTGCAAGATGTCGAATCCTTCGAACCCAACAGTAAATACACAATAC
ACGAGGTTGTTTTGGGACCTGGTTATAGTACTCCAGACTATACCGGCCAAACGATAGGATACGTTGTAACCCTTCCTGCC
CAAATGCCTAATTGCTGGTCATCTGAACTACCAACAATCGATCTTTATATCGACCAACTTCGCACTGTTACAGGCGTTTC
TAATGCCCTCGGATTCATCATTGCTGCATTGCTAAACGCGTATTCTGATTTACCCCATGATTTGAAAATTGGTCTACGTT
CCTTATCAAATTCAGCAGCAATCTACTCGGGTTTAGGTTTCGAGCGAGTGCCGCAGGACCGAGACATAAGGAGTGATCGT
ATGCATCTAACGCCAGCAAACCATCCTGACTTATGGACACAAGAGAATGGTGAATGGATCTACTTGCGAAACTAA

Upstream 100 bases:

>100_bases
TCACTACTTCAGAAAACAAACTTATTTTTATTAATATCGATTCTTTTTCTGTGAACATCAGCTGCGATATTTATAAAAAC
ATTAAACAGGTAACATTACA

Downstream 100 bases:

>100_bases
TACCTGACGAAAAATAGAAAGCAAAACGCCGACCAATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCT
ACTACGTTTACGATCACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTLPTTIYSFPAYSPHFSSTDKPVKLKFHQYARATLLPNRGRDHNCDGRRTVEIHKLDLSDWQAFNKLATKCNAYDGVTM
NGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYSTPDYTGQTIGYVVTLPA
QMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSDR
MHLTPANHPDLWTQENGEWIYLRN

Sequences:

>Translated_264_residues
MTLPTTIYSFPAYSPHFSSTDKPVKLKFHQYARATLLPNRGRDHNCDGRRTVEIHKLDLSDWQAFNKLATKCNAYDGVTM
NGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYSTPDYTGQTIGYVVTLPA
QMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSDR
MHLTPANHPDLWTQENGEWIYLRN
>Mature_263_residues
TLPTTIYSFPAYSPHFSSTDKPVKLKFHQYARATLLPNRGRDHNCDGRRTVEIHKLDLSDWQAFNKLATKCNAYDGVTMN
GDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYSTPDYTGQTIGYVVTLPAQ
MPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSDRM
HLTPANHPDLWTQENGEWIYLRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiC [H]

Homologues:

Organism=Escherichia coli, GI1790648, Length=264, Percent_Identity=95.0757575757576, Blast_Score=528, Evalue=1e-151,
Organism=Escherichia coli, GI1790781, Length=226, Percent_Identity=41.5929203539823, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021220 [H]

Pfam domain/function: PF10887 DUF2686 [H]

EC number: NA

Molecular weight: Translated: 29787; Mature: 29655

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPTTIYSFPAYSPHFSSTDKPVKLKFHQYARATLLPNRGRDHNCDGRRTVEIHKLDLS
CCCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHEECCCCCCCCCCCCCEEEEEEEECCH
DWQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DVESFEPNSKYTIHEVVLGPGYSTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQL
HHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEHHHHHH
RTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSDR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCC
MHLTPANHPDLWTQENGEWIYLRN
EEECCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
TLPTTIYSFPAYSPHFSSTDKPVKLKFHQYARATLLPNRGRDHNCDGRRTVEIHKLDLS
CCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHEECCCCCCCCCCCCCEEEEEEEECCH
DWQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DVESFEPNSKYTIHEVVLGPGYSTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQL
HHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEHHHHHH
RTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSDR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCC
MHLTPANHPDLWTQENGEWIYLRN
EEECCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]