| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yfjX [H]
Identifier: 218697845
GI number: 218697845
Start: 4750244
End: 4751098
Strand: Reverse
Name: yfjX [H]
Synonym: EC55989_4636
Alternate gene names: 218697845
Gene position: 4751098-4750244 (Counterclockwise)
Preceding gene: 218697849
Following gene: 218697844
Centisome position: 92.17
GC content: 55.09
Gene sequence:
>855_bases GTGGGTGATGGCAGAAACGCTGCTGGAGAGCCTGCGCTGATGCAGCATGTCCCTGAAGGCGTGATTCAGGCACCAGAATC ACCCGACGCCCCGGAGGCGCTGCCGGGGTGTCGTTCCATTTCTGATGATGACCTGTGCGCCTGGTGTACCCGTCTGCTTT ACCGTCCCGGAGAAATCAGTCTGTGCAGACTGAGTATACAGGCAATGGCATCTGGCCATCCGTCTGTGACCGGAACGGTT ACGCGTACGGCTGTCCGGAATTTCAGCCGAATATCATTCATCCCTGATATTACCGGGTCATCACGGTCAGTGATGAACGT GATGTTGCCAGCTCCCGACCTTTACTCCCTCTCATTTATTCACATTACAAGGATTTCATACATGAAAACATTGTCTCAGA ACACCACCTCTTCGGCCTGTGCACCGGAGACTGACCTGCAACAACTGGTTGCCACCCTCGTCCCTGATGAACAGCGCATC AGCTTCTGGCCGCAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGTGTCTTCGGCTGGATGGACCGTCT GTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGGGCATTTATAGCACCCGAACCGGATG ACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAGTCCGGAAGCTGCCGGCATT GCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTTATGCCATGACGGTCCATTATTACCGGCTGCG GGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATCGACTGA
Upstream 100 bases:
>100_bases CGGGGCGGTTCAGGATTTCCGGCCGCAGTGCAAAAGGAAAACGTATCCACACCCGTGCCATTCACAACATCGACACCGAT ATTAAGCTCAACCGCGCATT
Downstream 100 bases:
>100_bases ATGGTGGCAGGGACAATGCAGCAGCTTTCCTTTCTGCCCGGAGAAATGACAACCAGAGAGCGCAGCCTCATTCTGCGGGC CCTGAAAACCCTGGACCGCC
Product: conserved hypothetical protein; putative antirestriction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGDGRNAAGEPALMQHVPEGVIQAPESPDAPEALPGCRSISDDDLCAWCTRLLYRPGEISLCRLSIQAMASGHPSVTGTV TRTAVRNFSRISFIPDITGSSRSVMNVMLPAPDLYSLSFIHITRISYMKTLSQNTTSSACAPETDLQQLVATLVPDEQRI SFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFIAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGI AACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
Sequences:
>Translated_284_residues MGDGRNAAGEPALMQHVPEGVIQAPESPDAPEALPGCRSISDDDLCAWCTRLLYRPGEISLCRLSIQAMASGHPSVTGTV TRTAVRNFSRISFIPDITGSSRSVMNVMLPAPDLYSLSFIHITRISYMKTLSQNTTSSACAPETDLQQLVATLVPDEQRI SFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFIAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGI AACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID >Mature_283_residues GDGRNAAGEPALMQHVPEGVIQAPESPDAPEALPGCRSISDDDLCAWCTRLLYRPGEISLCRLSIQAMASGHPSVTGTVT RTAVRNFSRISFIPDITGSSRSVMNVMLPAPDLYSLSFIHITRISYMKTLSQNTTSSACAPETDLQQLVATLVPDEQRIS FWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFIAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIA ACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=137, Percent_Identity=74.4525547445255, Blast_Score=224, Evalue=7e-60, Organism=Escherichia coli, GI1786442, Length=157, Percent_Identity=66.2420382165605, Blast_Score=223, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 31545; Mature: 31414
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDGRNAAGEPALMQHVPEGVIQAPESPDAPEALPGCRSISDDDLCAWCTRLLYRPGEIS CCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE LCRLSIQAMASGHPSVTGTVTRTAVRNFSRISFIPDITGSSRSVMNVMLPAPDLYSLSFI EEEEEHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCEEHHH HITRISYMKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCEEEECCHH FGWMDRLCEDYCGGIWNLYTLNNGGAFIAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGI HHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH AACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure GDGRNAAGEPALMQHVPEGVIQAPESPDAPEALPGCRSISDDDLCAWCTRLLYRPGEIS CCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE LCRLSIQAMASGHPSVTGTVTRTAVRNFSRISFIPDITGSSRSVMNVMLPAPDLYSLSFI EEEEEHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCEEHHH HITRISYMKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCEEEECCHH FGWMDRLCEDYCGGIWNLYTLNNGGAFIAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGI HHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH AACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]