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The map label for this gene is yjbH

Identifier: 218697734

GI number: 218697734

Start: 4629583

End: 4631679

Strand: Direct

Name: yjbH

Synonym: EC55989_4517

Alternate gene names: 218697734

Gene position: 4629583-4631679 (Clockwise)

Preceding gene: 218697733

Following gene: 218697735

Centisome position: 89.81

GC content: 54.03

Gene sequence:

>2097_bases
ATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCAT
TGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACTCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGA
GTCTGAACTATCGCGATAATGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTG
CGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTT
CGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGTACGG
GGCTGTTTGATGCGGAATATCTTGTTGCCAGCAAAGCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGATAT
CTGGGCACCAGCGGTAATGTAAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACA
GGCGGGATCTATCGACGGTAGCCAGATGTTCCACGGTCCTGCCTCACTGTTTGGCGGCGTGGAATACCAGACGCCCTGGC
AACCGCTGCGCCTGAAACTGGAGTATGAAGGCAATAATTATCAGCAGGATTTTGCCGGGAAGCTGGAGCAAAAAAGTAAG
TTTAACGTCGGTGCGATTTATCGCGTTACCGATTGGGCCGACGTTAACCTTAGCTATGAACGTGGCAACACCTTTATGTT
TGGCGTCACGCTGCGCACCAACTTTAACGATCTGCGCCCGTCTTACAACGATAACGCCCGCCCGCAATATCAACCGCAGC
CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAATCAGTTAACGCTGTTGAAATACAATGCCGGACTTGCCGATCCG
CAGATCCAGGCGAAAGGCGATACGCTGTATGTCACCGGCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCG
TGCTAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGTCTTAACATGCCGC
AGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGAAACGAAGCTGGCG
CAAAAACGCGTCGAGCCAGTGGTTCCGCAGTCCACCGAGCAGGGCTGGTATATCGACAAATCACGCTTTGATTTCCACAT
CGATCCGGTGCTGAACCAGTCGGTCGGTGGCCCGGAAAACTTTTACATGTATCAGCTGGGCGTGATGGGAACGGCAGATT
TGTGGCTGACGGACCATCTGCTGACCACCGGCAGCCTGTTTGCAAATCTTGCCAACAACTACGACAAGTTTAACTACACC
AATCCGCCGCAGGACTCGCACTTACCGCGCGTTCGTACCCATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAA
CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTATGGAGGTTATCTCGAAACCATGTTTG
GCGGTGCGGGGGCCGAAGTGTTGTATCGTCCGCTGGACAGTAACTGGGCGTTTGGTCTGGATGCCAACTACGTTAAACAG
CGCGACTGGCGTAGTGCAAAAGATATGATGAAATTCACCGACTACAGCGTGAAAACCGGACATCTGACCGCCTACTGGAC
GCCATCTTTCGCCCAGGACGTGTTGGTGAAAGCCAGCGTCGGGCAGTATCTGGCAGGGGATAAAGGCGGCACGCTGGAGA
TCGCCAAACGCTTTGATAGCGGCGTGGTGGTTGGCGGCTATGCCACGATCACTAATGTTTCAAAAGAAGAGTACGGCGAA
GGGGACTTCACCAAAGGCGTGTATGTCTCGGTACCGTTGGATCTCTTCTCGTCTGGCCCGACACGCAGCCGTGCGGCGAT
TGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTA
GCGTCAATTTCCGCTAA

Upstream 100 bases:

>100_bases
GCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTG
ACGCAGCGGATACCCCAATA

Downstream 100 bases:

>100_bases
GTCATGGGAAAGGTGCCAGTTTTCGCAATCACTGGCACCCTCATTCTTAATGGCCTGTTGAGCCATCAGGAACGCAGTTC
ACCCCCGGTTTGCGATCTGG

Product: putative porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLA
QKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR

Sequences:

>Translated_698_residues
MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLA
QKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
>Mature_698_residues
MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLA
QKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=698, Percent_Identity=99.8567335243553, Blast_Score=1442, Evalue=0.0,
Organism=Escherichia coli, GI1787219, Length=696, Percent_Identity=64.5114942528736, Blast_Score=949, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 78519; Mature: 78519

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL
CCEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY
CCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEE
RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI
HHHHHCEEEEEEECCCCCCCEEEECCCEEEEECCCEEECCCCCCEEEECEEEECCCCCCC
KTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLAQKRVEPVVPQSTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEC
SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
CCCCEEECCHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEE
LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEEECCCEEECCCHHHCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
CCCCEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL
CCEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY
CCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEE
RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI
HHHHHCEEEEEEECCCCCCCEEEECCCEEEEECCCEEECCCCCCEEEECEEEECCCCCCC
KTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLAQKRVEPVVPQSTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEC
SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
CCCCEEECCHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEE
LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEEECCCEEECCCHHHCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
CCCCEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]