| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is higB-2 [H]
Identifier: 218697602
GI number: 218697602
Start: 4460067
End: 4460378
Strand: Direct
Name: higB-2 [H]
Synonym: EC55989_4364
Alternate gene names: 218697602
Gene position: 4460067-4460378 (Clockwise)
Preceding gene: 218697600
Following gene: 218697603
Centisome position: 86.52
GC content: 41.03
Gene sequence:
>312_bases ATGCTCTTCATCGAAACGGAAATTTTTACTGAAGATGTTCAAAAACTGCTGACCGACGATGAATTCAGTCGTTTTCAGTT TTTCCTGGCCTTGAATCCTGACTATGGTGAGGTAATACCTGAAACTGGTGGGTTAAGAAAGGTTCGATGGGTGTCAGGAG GAAAGGGGAAACGTGCTGGTGTCAGGGTTATTTACTTTCATCAGGTTAAACATTATGAGATCAGATTACTGCTTATTTAT CGTAAGGGTATTAAAGATGATCTGTCTCCCCAGGAAAAAGCAATGCTCCGGTTGTTAAATACGAGGTGGTAA
Upstream 100 bases:
>100_bases GACGTGGTTTTGCTGGAGCACTATCAGTAAGCTAGTGGTTTCAAGGGTACGTCAATGACGTACAAAAAGGATTGTTACTC TAAGCCAATGGCGTATAATT
Downstream 100 bases:
>100_bases ATGGATAAGGCACTTTTTGAGCGGTTGACTCACAGCATGGCCCAGATGAATGAAATTATTGAAGGAACGCGACAGCCTTC GCGGACTTTTGAAGTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAGVRVIYFHQVKHYEIRLLLIY RKGIKDDLSPQEKAMLRLLNTRW
Sequences:
>Translated_103_residues MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAGVRVIYFHQVKHYEIRLLLIY RKGIKDDLSPQEKAMLRLLNTRW >Mature_103_residues MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAGVRVIYFHQVKHYEIRLLLIY RKGIKDDLSPQEKAMLRLLNTRW
Specific function: Inhibits translation by cleavage of mRNA [H]
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12190; Mature: 12190
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAG CEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC VRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTRW EEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAG CEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC VRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTRW EEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]