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The map label for this gene is yihF

Identifier: 218697575

GI number: 218697575

Start: 4427897

End: 4429327

Strand: Direct

Name: yihF

Synonym: EC55989_4337

Alternate gene names: 218697575

Gene position: 4427897-4429327 (Clockwise)

Preceding gene: 218697574

Following gene: 218697577

Centisome position: 85.9

GC content: 41.3

Gene sequence:

>1431_bases
ATGATACATAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCA
AATTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGT
TAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGAT
CTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACGGTCCGTTGCCCATCACAATGTTAATGCA
TGGTAATGTCATCCCAGCACTGGCAGCGGCAAAAGTGAACTTAGTGAATAATGAACTGACACAACCGCTATTTATCGCCG
CGAAAAATAAATCGCCCGTGGAAGCGACATTGCGATTCGCGTTTGGTGGCTCATTCTCTACGACATTAGATGTTGCCCCT
GCAGAGTATGGAAAGTTTTCTTTTGGTGAGGGCCAGTTTACTTTTAATGGTGATGGTAGTTCATTGTCTAACCTGGATAT
TGAAGGCAAAGTCGAAGATATTGTTCTGCAATTATCACCAATGAACAAAGTAACGGCAAAAAGTTTTACCATTGATTCTC
TGGCGCGATTAGAAGAAAAGAAATTTCCGGTTGGTGAAAGCGAGTCGAAATTTAATCAGATTAACATTATCAATCACGGG
GAAGACGTTGCCCAAATCGATGCTTTCGTTGCAAAAACCATGCTGGATCGCGTTAAAGACAAAGATTATATCAATGTCAA
TCTGACCTACGAACTTGATAAGTTAACAAAAGGGAATCAGCAACTCGGTAGTGGTGAGTGGTCATTGATTGCTGAATCTA
TTGATCCCTCAGCGGTGCGCCAATTTATCATCCAGTATAACATTGCAATGCAGAAGCAGCTTGCTGCACACCCTGAGTTA
GCAAACGATGAAGTTGCTCTGCAAGAAGTGAATGCTGCATTGTTCAAAGAGTATTTACCGTTATTACAAAAAAGTGAGCC
GACCATTAAACAACCGGTAAAATGGAAGAACGCACTCGGCGAACTAAATGCCAATCTGGATATCAGTATTGCCGACCCAG
CCAAATCTTCATCATCCACAAACAAAGATATTAAATCGCTCAATTTTGATGTGAAGTTACCGCTTAATGTCGTCACAGAA
ACCGCAAAACAGCTTAATTTATCTGAAGGAATGGATGCGGAAAAAGCGCAAAAGCGGGCTGATAAACAAATCAGCGGGAT
GATGACCTTAGGTCAGATGTTTCAGTTAATCACGATTGACAACAATACCGCCTCGCTGCAACTGCGTTATACACCGGGTA
AAGTTGTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAA

Upstream 100 bases:

>100_bases
AATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGCGGATATTTAAAGTTTTGCTG
TTTTATCAGGGAATATTTAT

Downstream 100 bases:

>100_bases
AATACTCACTCGCCTCTGCTCATTCAGAGGCGAGCAAAATTTACTTGTCCTGCCGCTGTGATGACATCAACGACGTCAGA
AGTCGGTCTTTTTCCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFDKGFFNSRFQMQMTFDNGAPD
LNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG
EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPEL
ANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTE
TAKQLNLSEGMDAEKAQKRADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH

Sequences:

>Translated_476_residues
MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFDKGFFNSRFQMQMTFDNGAPD
LNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG
EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPEL
ANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTE
TAKQLNLSEGMDAEKAQKRADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH
>Mature_476_residues
MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFDKGFFNSRFQMQMTFDNGAPD
LNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG
EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPEL
ANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTE
TAKQLNLSEGMDAEKAQKRADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgA and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI87082339, Length=476, Percent_Identity=98.9495798319328, Blast_Score=965, Evalue=0.0,
Organism=Escherichia coli, GI1787900, Length=479, Percent_Identity=34.0292275574113, Blast_Score=265, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 52593; Mature: 52593

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFD
CCCCCHHHHHEEEEHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
KGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVN
CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHEEE
LVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGS
EHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEECCCCC
SLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG
CCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVR
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHH
QFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHH
ELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRA
HCCCCEEEEECCCCCCCCCCCCHHHHCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHH
DKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH
HHHHHHHHHHHCEEEEEEEECCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFD
CCCCCHHHHHEEEEHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
KGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVN
CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHEEE
LVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGS
EHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEECCCCC
SLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG
CCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVR
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHH
QFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHH
ELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRA
HCCCCEEEEECCCCCCCCCCCCHHHHCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHH
DKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH
HHHHHHHHHHHCEEEEEEEECCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7881552; 8346018; 9278503 [H]