| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yhiS [H]
Identifier: 218697214
GI number: 218697214
Start: 4017600
End: 4018745
Strand: Direct
Name: yhiS [H]
Synonym: EC55989_3947
Alternate gene names: 218697214
Gene position: 4017600-4018745 (Clockwise)
Preceding gene: 218697213
Following gene: 218697215
Centisome position: 77.94
GC content: 34.21
Gene sequence:
>1146_bases ATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATTTATAACTGCACAACAAATACCGATAATGC TAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTGGGAAGAACAACAACCCATTAATTCCACATTCTCTGGAGAAG GATATATCTCTGATCAATATGATTTAGCGCAACACCAACTTCAACAAATTAATGCGTGCCACACGAACACTACATATACA AATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTAC GCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAAACAAAAGTGCTGAATGTCGAATCATTG TTGTCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTC CAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCT GTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTA TTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTAACCTTGTCAAGGTTTTATTTCGAAGATCTACTTAAT ATAAATTTCACTGACGCAAATTTAGGTGACACTATTTTTTACATAAAGAACACCCTACCCCCCAAATTATATAAAGATGG ACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACTTTTTACGAGCAAAAGCGG AAATTGCTTCGACAATAATTAAATTTTTAGAGGCTAGGATAACCAATCTTTCATACAATGACATATTAACATATCAGCAA GAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTGCGACACTCTCTCGATACAATAAAATTCAAACATGGGCAGA AATGTCTGAATATCAGTTCGAAGTATTTCAATACGAGACGCTTAACCCCAAAAAAATGTCACACACGCCTTATTTAAAGA GCCACTTCCTAATGAAAAAGATATAA
Upstream 100 bases:
>100_bases TAACGCATTATATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACA AATGATGAATAAGGAATTTT
Downstream 100 bases:
>100_bases ATTATGGGGTGGAAATAGAAATACCATCTGGCAAAAGAATTCGCTTATCAAATCATTATCAGAATATAATACCATAATAT TGATTATTAGCACTTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYT NADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSV QTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLN INFTDANLGDTIFYIKNTLPPKLYKDGQYLDKQIEGLFSTLLTINDNFLRAKAEIASTIIKFLEARITNLSYNDILTYQQ EFQKQCYKQVKAFATLSRYNKIQTWAEMSEYQFEVFQYETLNPKKMSHTPYLKSHFLMKKI
Sequences:
>Translated_381_residues MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYT NADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSV QTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLN INFTDANLGDTIFYIKNTLPPKLYKDGQYLDKQIEGLFSTLLTINDNFLRAKAEIASTIIKFLEARITNLSYNDILTYQQ EFQKQCYKQVKAFATLSRYNKIQTWAEMSEYQFEVFQYETLNPKKMSHTPYLKSHFLMKKI >Mature_380_residues SIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTN ADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSVQ TMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNI NFTDANLGDTIFYIKNTLPPKLYKDGQYLDKQIEGLFSTLLTINDNFLRAKAEIASTIIKFLEARITNLSYNDILTYQQE FQKQCYKQVKAFATLSRYNKIQTWAEMSEYQFEVFQYETLNPKKMSHTPYLKSHFLMKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44012; Mature: 43881
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQY CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTN EECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEHEECCCHHHHHHHHCCCCCC IKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLN HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCC INFTDANLGDTIFYIKNTLPPKLYKDGQYLDKQIEGLFSTLLTINDNFLRAKAEIASTII CCCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KFLEARITNLSYNDILTYQQEFQKQCYKQVKAFATLSRYNKIQTWAEMSEYQFEVFQYET HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC LNPKKMSHTPYLKSHFLMKKI CCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQY CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTN EECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEHEECCCHHHHHHHHCCCCCC IKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLN HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCC INFTDANLGDTIFYIKNTLPPKLYKDGQYLDKQIEGLFSTLLTINDNFLRAKAEIASTII CCCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KFLEARITNLSYNDILTYQQEFQKQCYKQVKAFATLSRYNKIQTWAEMSEYQFEVFQYET HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC LNPKKMSHTPYLKSHFLMKKI CCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]