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The map label for this gene is glpD

Identifier: 218697108

GI number: 218697108

Start: 3897259

End: 3898764

Strand: Direct

Name: glpD

Synonym: EC55989_3833

Alternate gene names: 218697108

Gene position: 3897259-3898764 (Clockwise)

Preceding gene: 218697104

Following gene: 218697119

Centisome position: 75.6

GC content: 55.18

Gene sequence:

>1506_bases
ATGGAAACCAAAGATCTGATTGTGATAGGTGGCGGCATCAATGGTGCTGGTATCGCGGCAGACGCCGCTGGACGCGGTTT
ATCCGTGCTGATGCTGGAGGCGCAGGATCTCGCTTGCGCGACCTCTTCCGCCAGTTCAAAACTCATTCACGGTGGCCTGC
GCTACCTTGAGCACTATGAATTCCGCCTGGTCAGCGAGGCGCTGGCTGAACGTGAAGTGCTGCTGAAAATGGCTCCGCAT
ATCGCCTTCCCGATGCGTTTTCGCCTGCCACATCGTCCGCATCTGCGCCCGGCGTGGATGATTCGGATTGGTCTGTTTAT
GTACGATCATCTGGGTAAACGCACCAGCCTGCCGGGATCAACCGGTTTGCGTTTTGGCGCAAACTCAGTGTTAAAACCGG
AAATTAAGCGCGGATTCGAATATTCTGACTGTTGGGTAGACGACGCCCGTCTGGTACTCGCCAACGCCCAGATGGTGGTG
CGTAAAGGCGGCGAAGTGCTTACTCGGACTCGCGCCACCTCTGCTCGCCGCGAAAACGGCCTGTGGATTGTGGAAGCGGA
AGATATCGATACCGGCAAAAAATATAGCTGGCAAGCGCGCGGCCTGGTTAACGCCACCGGCCCGTGGGTGAAACAGTTCT
TCGACGAGGGGATGCATCTGCCTTCGCCTTATGGCATTCGCCTGATCAAAGGCAGCCATATTGTGGTGCCGCGTGTGCAT
ACCCAGAAGCAGGCCTACATTCTGCAAAACGAAGATAAACGTATTGTGTTCGTGATCCCGTGGATGGACGAATTTTCCAT
CATCGGCACCACCGACGTAGAGTATAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAACTATCTGCTGA
AAGTGTATAACGCGCACTTTAAAAAACAGCTTAGCCGTGACGATATCGTCTGGACCTACTCCGGTGTGCGTCCGCTGTGT
GATGATGAGTCCGACTCGCCGCAGGCTATTACCCGTGATTACACCCTTGATATCCATGATGAAAACGGCAAAGCACCGCT
GCTGTCGGTATTCGGCGGTAAGCTGACCACCTACCGAAAACTGGCAGAACATGCGCTGGAAAAACTGACGCCGTATTATC
AGGGTATTGGCCCGGCGTGGACGAAAGAGAGCGTGCTGCCGGGTGGTGCCATTGAAGGCGACCGCGACGATTACGCAGCT
CGTCTGCGCCGTCGCTATCCATTCCTGACTGAATCGCTGGCGCGTCATTACGCACGCACTTACGGCAGCAACAGCGAGCT
GCTGCTCGGCAATGCGGGGGCGATAAGCGACCTCGGGGAGGATTTCGGTCATGAGTTCTACGAAGCGGAACTGAAATACC
TGGTGGATCACGAATGGGTCCGCCGCACCGACGATGCCCTTTGGCGTCGCACAAAACAAGGCATGTGGCTGAATGCGGAT
CAACAATCTCGTGTGAGTCAGTGGCTGGTGGAATATACGCAGCAGAAGTTGTCGCTGGCGTCGTAA

Upstream 100 bases:

>100_bases
ACTCTAAAATGTTTTTTCAATGTTACCTAAAGCGCGATTCTTTGCTAATATGTTCGATAACGAACATTTATGAGCTTTAA
CGAAAGTGAATGAGGGCAGC

Downstream 100 bases:

>100_bases
GGATGATGCCCGGTTGAAGTGCAACCGGGCTATTTGGATTCCTTAGACTATTCATTGTAAATAATTGAATAACGGCCCCT
GAGCTAAAATCGCCAAACTT

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH
IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH
TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLC
DDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAA
RLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNAD
QQSRVSQWLVEYTQQKLSLAS

Sequences:

>Translated_501_residues
METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH
IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH
TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLC
DDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAA
RLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNAD
QQSRVSQWLVEYTQQKLSLAS
>Mature_501_residues
METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH
IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH
TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLC
DDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAA
RLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNAD
QQSRVSQWLVEYTQQKLSLAS

Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses molecular oxygen or nitrate as electron acceptor [H]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=538, Percent_Identity=30.2973977695167, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI285002231, Length=538, Percent_Identity=30.2973977695167, Blast_Score=174, Evalue=1e-43,
Organism=Escherichia coli, GI2367226, Length=501, Percent_Identity=98.6027944111776, Blast_Score=1024, Evalue=0.0,
Organism=Escherichia coli, GI1788574, Length=385, Percent_Identity=25.974025974026, Blast_Score=87, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI115534726, Length=514, Percent_Identity=29.7665369649805, Blast_Score=156, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17509253, Length=542, Percent_Identity=28.5977859778598, Blast_Score=152, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6322036, Length=531, Percent_Identity=28.2485875706215, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI161077125, Length=511, Percent_Identity=30.3326810176125, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24653942, Length=511, Percent_Identity=30.3326810176125, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24653944, Length=511, Percent_Identity=30.3326810176125, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI20130025, Length=511, Percent_Identity=30.3326810176125, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24586295, Length=502, Percent_Identity=27.0916334661355, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI19921278, Length=496, Percent_Identity=23.3870967741935, Blast_Score=89, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 56735; Mature: 56735

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYE
CCCCCEEEECCCCCCCCEECCCCCCCEEEEEEECCHHHEECCCCCHHHHHHHHHHHHHHH
FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
TGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG
CCCCCCCCCCCCHHHHCCCCCCCCEECCCEEEEECCHHHHHCCCHHEEHHHHHHHHHCCC
LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH
EEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCC
TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNAHF
CCCEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
KKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRK
HHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHCCCCHHHHHH
LAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYART
HHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
YGSNSELLLGNAGAISDLGEDFGHEFYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNAD
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
QQSRVSQWLVEYTQQKLSLAS
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYE
CCCCCEEEECCCCCCCCEECCCCCCCEEEEEEECCHHHEECCCCCHHHHHHHHHHHHHHH
FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
TGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG
CCCCCCCCCCCCHHHHCCCCCCCCEECCCEEEEECCHHHHHCCCHHEEHHHHHHHHHCCC
LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH
EEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCC
TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNAHF
CCCEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
KKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRK
HHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHCCCCHHHHHH
LAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYART
HHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
YGSNSELLLGNAGAISDLGEDFGHEFYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNAD
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
QQSRVSQWLVEYTQQKLSLAS
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987111; 9278503; 3045087; 3045764 [H]