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The map label for this gene is yhfS

Identifier: 218697056

GI number: 218697056

Start: 3839468

End: 3840553

Strand: Reverse

Name: yhfS

Synonym: EC55989_3781

Alternate gene names: 218697056

Gene position: 3840553-3839468 (Counterclockwise)

Preceding gene: 218697057

Following gene: 218697044

Centisome position: 74.5

GC content: 57.0

Gene sequence:

>1086_bases
ATGAAGACGTTTCCTCTGCAAAGCCTGACGATTATTGAGGCGCAGCAAAAGCAGTTTGCGCTGGTGGATAGCATTTGTCG
CCATTTCCCCGGCAGCGAGTTTCTTACTGGCGGTGATTTAGGCTTAACGCCAGGACTGAATCAACCGCGCGTTACCCAGC
GTGTGGAACAGGTGCTGGCTGATGCATTTCACGCACAGGCTGCGGCGCTGGTGCAGGGCGCGGGGACTGGCGCGATTCGC
GCCGGGCTGGCGGCTTTGCTCAAACCGGGGCAGCGTCTTCTGGTGCATGACGCGCCTGTTTACCCGACGACACGGGTTAT
TATTGAGCAGATGGGGCTGACGCTTATTACTGTTGATTTCAATGACCTGTCGGCACTGAAGCAGGTCGTCGACGAGCAAC
AACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCAACGTTG
CGCGCGGCAGGTGTTCCAGCGTTAACCGATGACAACTATGCGGTGATGAAGGTGGCGCGAATCGGCTGTGAATGCGGCGC
GAATGTCTCGACATTTTCCTGCTTCAAGCTATTTGGGCCAGAGGGTGTTGGTGCAGTGGTCGGCGATGCTGATGTTATCA
ACCGTATTCGCGCCACGCTTTACTCCGGCGGTAGCCAGATCCAGGGCGCACAGGCGCTGGAAGTATTGCGTGGTCTGGTG
TTTGCGCCAGTGATGCACGCGGTGCAGGCAGGGGTATCTGAACGGTTGCTGGCTTTGCTTAACGGTGGTGCGGTGCCGGA
AGTGAAAAGCGCGGTGATTGCTAATGCGCAGTCGAAGGTGTTGATTGTCGAGTTTCATCAGCCGATTGCCGCCAGAGTGC
TGGAAGAGGCGCAAAAGCGCGGTGCCTTGCCTTACCCGGTGGGTGCAGAGTCGAAATATGAAATCCCGCCGCTCTTTTAT
CGCCTTTCCGGAACGTTTCGCCAGGCGAATCCACAATCAGAACATTGTGCGATTCGCATTAACCCGAATCGCAGCGGTGA
AGAGACGGTGCTGCGGATTTTGCGTGAGAGTATTGCCAGTATTTAA

Upstream 100 bases:

>100_bases
AGAAAATGGCGGCACCGGTCGTGGCAGTAATGATCACCGGTATTCTGCTGAATGTTCTTTACTGGCTTGGCCTGTTCGTT
CCGGCTTAAGGAAGGCACCT

Downstream 100 bases:

>100_bases
TGCTGGATAGCACCGTCAAGCTAAATTCCGTACTGAACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAA
CGTACGGGATGTAAAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIR
AGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
FAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFY
RLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIASI

Sequences:

>Translated_361_residues
MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIR
AGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
FAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFY
RLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIASI
>Mature_361_residues
MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIR
AGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
FAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFY
RLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIASI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789777, Length=361, Percent_Identity=100, Blast_Score=728, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFS_ECOLI (P45545)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   C65132
- RefSeq:   AP_004414.1
- RefSeq:   NP_417835.1
- ProteinModelPortal:   P45545
- DIP:   DIP-12328N
- STRING:   P45545
- EnsemblBacteria:   EBESCT00000002451
- EnsemblBacteria:   EBESCT00000018079
- GeneID:   947884
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3339
- KEGG:   eco:b3376
- EchoBASE:   EB2750
- EcoGene:   EG12914
- eggNOG:   NOG29623
- GeneTree:   EBGT00050000009328
- HOGENOM:   HBG344956
- OMA:   GGSQVQG
- ProtClustDB:   CLSK891811
- BioCyc:   EcoCyc:G7728-MONOMER
- Genevestigator:   P45545
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- Gene3D:   G3DSA:3.40.640.10

Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major

EC number: NA

Molecular weight: Translated: 38600; Mature: 38600

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLA
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
DAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDF
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEC
NDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVAR
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
HHHHCCCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKR
HHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC
GALPYPVGAESKYEIPPLFYRLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIAS
CCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLA
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
DAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDF
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEC
NDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVAR
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
HHHHCCCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKR
HHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC
GALPYPVGAESKYEIPPLFYRLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIAS
CCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503