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The map label for this gene is ygcH [C]

Identifier: 218696354

GI number: 218696354

Start: 3095608

End: 3096396

Strand: Reverse

Name: ygcH [C]

Synonym: EC55989_3029

Alternate gene names: 218696354

Gene position: 3096396-3095608 (Counterclockwise)

Preceding gene: 218696355

Following gene: 218696353

Centisome position: 60.07

GC content: 55.64

Gene sequence:

>789_bases
ATGCTGGTGGGAAGGGAAACACGAGGGCCTGGTCGCGAGCAAAATATTACGCCGCCGGGATGTTCCTTTAAATCGTCAGC
AGTGGCTGTTTGGGGAACGCACCGTCAATCAGGGGCCGTGGCTCAGCAAGGAGGAACCATGTACCTCTCAAGAATAACCT
TACATACCGGCCAGCTTTCGCCTGCGCAGTTGCTGCATCTGGTGGATCGCGGTGAATATGTGATGCATCAGTGGCTGTGG
GATCTCTTCCCTGGCGGCAAAGAAAGGCAATTTCTTTATCGTCGGGAAGAACTCCAGGGCGCGTTTCGCTTTTTTGTCCT
CTCGCAGGCACGCCCGGCGGAAAGTGAAACTTTCACCATCGAATGCCGACCATTTGTGTCCGAGCTGCGTACCGGACAAT
CTCTTTGTTTCAACCTGCGGGCGAATCCAACAATCTGTAAAGCGGGCAAGCGCCACGATCTGCTGATGGAGGCGAAACGG
CAGGTGAAGGGGCAGGCGGAAGGGCGTGATATCTGGTTGCATCAACAACAGGCGGCGCTGGACTGGCTGGCAGCGCAGGG
GGAAAGAAGTGGTTTTACACTACTGGATACCTCGGTTGATGCCTACCGACAACAACAACTCCGGCGGGAAAACACCCGGC
AACTGATCCAGTTCAGTAGCGTGGATTATACGGGGATGCTTACGGTCACCGATCCCGGGTTATTTCTGCAACGTCTCAGT
CAGGGGTATGGCAAAAGCCGGGCGTTCGGCTGTGGTCTGATGCTGATCAAACCCGGAGCAGAGGCGTGA

Upstream 100 bases:

>100_bases
TGCTCGAAGGCAACGCGTGTGATGCCTTATGTAATGCATACCAACAGTATCAGGATCATTTCCATAAACTGAAAGTCTCA
CTCCCAAAACTTCAGGATGA

Downstream 100 bases:

>100_bases
CGTTTGTACCACTGAGTCCGATCCCGTTAAAAGATCGCACCTCCATGATCTTCCTCCAGTACGGTCAAATCGACGTACTG
GACGGTGCTTTCGTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cse3 Family Protein; Cse3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein Cse3 Family Protein; CRISPR-Associated Protein CT

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLVGRETRGPGREQNITPPGCSFKSSAVAVWGTHRQSGAVAQQGGTMYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLW
DLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKR
QVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLS
QGYGKSRAFGCGLMLIKPGAEA

Sequences:

>Translated_262_residues
MLVGRETRGPGREQNITPPGCSFKSSAVAVWGTHRQSGAVAQQGGTMYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLW
DLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKR
QVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLS
QGYGKSRAFGCGLMLIKPGAEA
>Mature_262_residues
MLVGRETRGPGREQNITPPGCSFKSSAVAVWGTHRQSGAVAQQGGTMYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLW
DLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKR
QVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLS
QGYGKSRAFGCGLMLIKPGAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29509; Mature: 29509

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVGRETRGPGREQNITPPGCSFKSSAVAVWGTHRQSGAVAQQGGTMYLSRITLHTGQLS
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCEEEEEEEEEECCCCC
PAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTI
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEE
ECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVKGQAEGRDIWLHQQQAAL
EECHHHHHHCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHH
DWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLS
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHH
QGYGKSRAFGCGLMLIKPGAEA
HCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MLVGRETRGPGREQNITPPGCSFKSSAVAVWGTHRQSGAVAQQGGTMYLSRITLHTGQLS
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCEEEEEEEEEECCCCC
PAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTI
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEE
ECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVKGQAEGRDIWLHQQQAAL
EECHHHHHHCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHH
DWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLS
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHH
QGYGKSRAFGCGLMLIKPGAEA
HCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA