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The map label for this gene is ygbF

Identifier: 218696352

GI number: 218696352

Start: 3094398

End: 3094691

Strand: Reverse

Name: ygbF

Synonym: EC55989_3027

Alternate gene names: 218696352

Gene position: 3094691-3094398 (Counterclockwise)

Preceding gene: 218696353

Following gene: 218696350

Centisome position: 60.03

GC content: 47.96

Gene sequence:

>294_bases
ATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCG
TGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTG
GAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCG
GTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAA

Upstream 100 bases:

>100_bases
CAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGC
GGTCATCGAGGACGCGGCTG

Downstream 100 bases:

>100_bases
GTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACA
GATATGTATGCTTAGTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGKNRRIP
VDLDGLRLVSFLPVDNQ

Sequences:

>Translated_97_residues
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGKNRRIP
VDLDGLRLVSFLPVDNQ
>Mature_96_residues
SMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGKNRRIPV
DLDGLRLVSFLPVDNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=94, Percent_Identity=86.1702127659574, Blast_Score=164, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11003; Mature: 10872

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAW
CCEEEEEECCCCCHHCCEEEEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEE
ATNTESGFEFQTWGKNRRIPVDLDGLRLVSFLPVDNQ
ECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
SMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAW
CEEEEEECCCCCHHCCEEEEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEE
ATNTESGFEFQTWGKNRRIPVDLDGLRLVSFLPVDNQ
ECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]