| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is gutM
Identifier: 218696297
GI number: 218696297
Start: 3039625
End: 3039984
Strand: Direct
Name: gutM
Synonym: EC55989_2968
Alternate gene names: 218696297
Gene position: 3039625-3039984 (Clockwise)
Preceding gene: 218696296
Following gene: 218696298
Centisome position: 58.97
GC content: 55.28
Gene sequence:
>360_bases ATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTT TAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGGCCGTTCCAGCGGGCGCTTTAAACCGCGGGTCG TGGTCGCCATCGCGCTGGACGATCAGCAGCGCATCGTCGACACCTTGTTTATGAAAGGACTGACCGTCTTCGCCCGACCG CAAAAAATTCCCGCAATTACCGGCATGCATGCGGGTGATTTACAGCCCGATGTGATCTTTCCCCATGATCCACTATCACA GAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAA
Upstream 100 bases:
>100_bases CAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGC CACTACATTAAGGAAAAGTT
Downstream 100 bases:
>100_bases TTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCA GCGTCAGGCCGCCATTCTGG
Product: DNA-binding transcriptional activator GutM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARP QKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG
Sequences:
>Translated_119_residues MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARP QKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG >Mature_119_residues MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARP QKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG
Specific function: Positive regulator for glucitol operon expression
COG id: COG4578
COG function: function code K; Glucitol operon activator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789058, Length=119, Percent_Identity=100, Blast_Score=241, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GUTM_ECOLI (P15081)
Other databases:
- EMBL: J02708 - EMBL: X13463 - EMBL: U29579 - EMBL: U00096 - EMBL: AP009048 - PIR: S01831 - RefSeq: AP_003273.1 - RefSeq: NP_417186.1 - STRING: P15081 - EnsemblBacteria: EBESCT00000002606 - EnsemblBacteria: EBESCT00000018227 - GeneID: 948938 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW2675 - KEGG: eco:b2706 - EchoBASE: EB0965 - EcoGene: EG10972 - eggNOG: COG4578 - GeneTree: EBGT00050000009846 - HOGENOM: HBG297192 - OMA: DDQQCIV - ProtClustDB: PRK10234 - BioCyc: EcoCyc:PD00345 - Genevestigator: P15081 - GO: GO:0006350 - InterPro: IPR009693 - PIRSF: PIRSF011474
Pfam domain/function: PF06923 GutM
EC number: NA
Molecular weight: Translated: 12953; Mature: 12953
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC DQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG CHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCCCEECCCCCCCCCCEEHHEEECCC >Mature Secondary Structure MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC DQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG CHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCCCEECCCCCCCCCCEEHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3062173; 9205837; 9278503