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The map label for this gene is ygaH

Identifier: 218696279

GI number: 218696279

Start: 3021039

End: 3021374

Strand: Direct

Name: ygaH

Synonym: EC55989_2950

Alternate gene names: 218696279

Gene position: 3021039-3021374 (Clockwise)

Preceding gene: 218696278

Following gene: 218696280

Centisome position: 58.61

GC content: 54.76

Gene sequence:

>336_bases
ATGAGCTATGAGGTTCTGCTGCTTGGGTTACTGGTTGGCGTGGCGAATTATTGCTTCCGCTATTTGCCGCTGCGCCTGCG
TGTGGGTAATGCCCGCCCAACCAAACGTGGCGCGGTAGGTATTTTGCTCGACACCATTGGCATCGCCTCGATATGCGCTC
TGCTGGTTGTCTCTACCGCACCAGAAGTGATGCACGATACACGCCGTTTCGTGCCCACGCTGGTCGGCTTCGCGGTACTG
GGTGCCAGTTTCTATAAAACACGCAGCATTATCATCCCAACACTGCTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGT
GATGGCGATTATATAA

Upstream 100 bases:

>100_bases
GCAGGCGTAACGCTATTTTCTATTCCCGTCGCCATTCTGGCAGGCATTGTCTGTGGCTGCCTCACTGCGTTAATCCAGGC
ATTCTGGCAAGGAGCGCCCG

Downstream 100 bases:

>100_bases
CCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGG
TCATACCCAAATGGATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVL
GASFYKTRSIIIPTLLSALAYGLAWKVMAII

Sequences:

>Translated_111_residues
MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVL
GASFYKTRSIIIPTLLSALAYGLAWKVMAII
>Mature_110_residues
SYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLG
ASFYKTRSIIIPTLLSALAYGLAWKVMAII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789039, Length=111, Percent_Identity=100, Blast_Score=219, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGAH_ECOLI (P43667)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   U19993
- PIR:   D65048
- RefSeq:   AP_003255.1
- RefSeq:   NP_417168.1
- ProteinModelPortal:   P43667
- STRING:   P43667
- EnsemblBacteria:   EBESCT00000004498
- EnsemblBacteria:   EBESCT00000014571
- GeneID:   945111
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2658
- KEGG:   eco:b2683
- EchoBASE:   EB2775
- EcoGene:   EG12940
- eggNOG:   NOG14067
- GeneTree:   EBGT00050000010691
- HOGENOM:   HBG416921
- OMA:   TRSIVLS
- ProtClustDB:   PRK10408
- BioCyc:   EcoCyc:G7406-MONOMER
- Genevestigator:   P43667
- InterPro:   IPR008407

Pfam domain/function: PF05437 AzlD

EC number: NA

Molecular weight: Translated: 12024; Mature: 11893

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTA
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTA
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7730261