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The map label for this gene is yfiR

Identifier: 218696227

GI number: 218696227

Start: 2965123

End: 2965641

Strand: Direct

Name: yfiR

Synonym: EC55989_2892

Alternate gene names: 218696227

Gene position: 2965123-2965641 (Clockwise)

Preceding gene: 218696226

Following gene: 218696228

Centisome position: 57.52

GC content: 45.66

Gene sequence:

>519_bases
ATGCGTTTTTCTCACCGACTGTTCTTACTTCTGATTCTCCTGCTGACGGGAGCACCAATACTCGCTCAGGAGCCTTCTGA
CGTTGCGAAAAACGTGCGTATGATGGTTTCCGGTATTGTCAGTTACACCCGCTGGCCTGCGCTATCAGGGCCACCAAAGT
TATGTATCTTTTCATCTTCACGTTTTAGTACCGCCCTACAAGAGAATGCCGCGACATCTTTGCCTTATCTGCCTGTCATC
ATTCACACTCAACAAGAGGCGATGATTTCAGGCTGCAATGGTTTTTATTTTGGCAACGAGTCACCGACATTCCAGATGGA
ATTAACCGAACAATATCCGTCAAAGGCGTTATTATTAATTGCCGAACAAAATACCGAGTGCATTATTGGTAGCGCCTTTT
GTCTGATCATCCACAATAATGACGTCAGATTTGCCGTAAACCTGGATGCCTTATCGCGTAGCGGTGTAAAGGTCAACCCG
GATGTCTTAATGCTCGCACGGAAGAAAAATGATGGATAA

Upstream 100 bases:

>100_bases
ATTTCTCACATTGATGACGATCGCATGAAAAAATGATATTTTAATGAGCATTCTGAAAAAATATCGATGCATTTCGAGCG
AAGATGGTGGGGATCCCTGA

Downstream 100 bases:

>100_bases
CGATAATTCTCTTAATAAGCGCCCCACGTTTAAAAGAGCATTACGCAACATCAGTATGACCAGCATATTTATCACTATGA
TGCTGATCTGGTTGCTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVI
IHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
DVLMLARKKNDG

Sequences:

>Translated_172_residues
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVI
IHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
DVLMLARKKNDG
>Mature_172_residues
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVI
IHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
DVLMLARKKNDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788955, Length=172, Percent_Identity=100, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFIR_ECO57 (P64549)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B91062
- PIR:   F85906
- RefSeq:   NP_289156.1
- RefSeq:   NP_311493.1
- ProteinModelPortal:   P64549
- EnsemblBacteria:   EBESCT00000024248
- EnsemblBacteria:   EBESCT00000055263
- GeneID:   914829
- GeneID:   956960
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3897
- KEGG:   ecs:ECs3466
- GeneTree:   EBGT00050000008759
- HOGENOM:   HBG691492
- OMA:   GPTEYAD
- ProtClustDB:   CLSK880441
- BioCyc:   ECOL83334:ECS3466-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18978; Mature: 18978

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSS
CCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
RFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLI
HHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEEEE
AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG
EECCCCEEEEEEEEEEEECCCEEEEEEEHHHCCCCCEECCCEEEEEEECCCC
>Mature Secondary Structure
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSS
CCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
RFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLI
HHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEEEE
AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG
EECCCCEEEEEEEEEEEECCCEEEEEEEHHHCCCCCEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796