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The map label for this gene is dedA

Identifier: 218695916

GI number: 218695916

Start: 2631693

End: 2632352

Strand: Reverse

Name: dedA

Synonym: EC55989_2561

Alternate gene names: 218695916

Gene position: 2632352-2631693 (Counterclockwise)

Preceding gene: 218695917

Following gene: 218695915

Centisome position: 51.07

GC content: 47.73

Gene sequence:

>660_bases
ATGGACCTGATTTATTTCCTCATCGATTTTATCCTGCACATTGACGTGCATCTGGCAGAGCTGGTCGCGGAGTACGGCGT
CTGGGTTTATGCCATTCTGTTTTTGATTCTGTTCTGCGAAACGGGGCTGGTGGTAACGCCATTCCTGCCTGGTGATTCGC
TGCTGTTTGTTGCTGGTGCATTGGCGTCGCTGGAAACTAACGATCTCAATGTCCATATGATGGTGGTGCTTATGTTGATT
GCCGCTATTGTCGGTGATGCAGTGAACTATACCATTGGACGGTTATTTGGTGACAAACTGTTCAGTAACCCGGATTCGAA
AATCTTTCGTCGCAGTTATCTTGATAAGACTCATCAGTTTTACGAGAGACATGGCGGCAAAACGATTATTCTCGCCCGTT
TTGTACCGATCGTCAGAACGTTCGCGCCGTTTGTTGCGGGAATGGGCCACATGTCGTACCGTCATTTCGCCGCTTATAAC
GTGATCGGCGCACTGTTGTGGGTACTGATTTTTACCTACGCGGGTTATTTCTTCGGCACGCTCCCCTTCATTCAGAGCAA
CCTTAAGCTGATGATTGTTGGCATTATTTTTGTTTCAATATTGCCTGGGGTTTTCGAATTTATTCGTCACAAACGCGCTG
CGGCACGCGCCGCAAAATAA

Upstream 100 bases:

>100_bases
CTATTTCTGGCGGACTAACGAGAATAATGCTCGGAACATTTCAGGCTGTAGCCAACGTAGTTACAGCCTGAAAGATGACG
AGTACAAGGCATAGGCAAAT

Downstream 100 bases:

>100_bases
AAAGTAACTCCGCGGTTCGACCACTTTTTTATCCAAAGTTTCGGGCTGTTATGTTTTAATGTGCAACATTCATGGTCTGT
TGGGGGCAAAAATGGCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLI
AAIVGDAVNYTIGRLFGDKLFSNPDSKIFRRSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLIFTYAGYFFGTLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK

Sequences:

>Translated_219_residues
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLI
AAIVGDAVNYTIGRLFGDKLFSNPDSKIFRRSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLIFTYAGYFFGTLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK
>Mature_219_residues
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLI
AAIVGDAVNYTIGRLFGDKLFSNPDSKIFRRSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLIFTYAGYFFGTLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=94.2857142857143, Blast_Score=403, Evalue=1e-114,
Organism=Escherichia coli, GI1789481, Length=164, Percent_Identity=34.1463414634146, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1789384, Length=194, Percent_Identity=30.9278350515464, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24662; Mature: 24662

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFSNPDSKIFRRSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLIFTYAGYFFGT
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFSNPDSKIFRRSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLIFTYAGYFFGT
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]