| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yeaX
Identifier: 218695365
GI number: 218695365
Start: 2036251
End: 2037216
Strand: Direct
Name: yeaX
Synonym: EC55989_1976
Alternate gene names: 218695365
Gene position: 2036251-2037216 (Clockwise)
Preceding gene: 218695364
Following gene: 218695371
Centisome position: 39.5
GC content: 50.52
Gene sequence:
>966_bases ATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGTCAGGTGGAACCGCTTACCGAACAGGTGAAACGCTTCACGCTGGT GGCAACCGATGGCAAACCGCTGCCTGCGTTCACCGGAGGAAGTCACATCATTGTGCAGATGAGCGATGGTGATAACCAGT ACAGCAATGCGTATTCACTACTGAGTTCGCCGCATGACACCTCTTGTTATCAGATTGCCGTTCGGCTGGAGGAAAACTCG CGCGGCGGTTCCCGCTTTTTGCATCAGCAGGTAAAAGTGGGCGATCGGTTAACGATTTCAACGCCTAATAACCTGTTTGC GCTAATTCCCTCAGCCAGAAAGCATCTGTTTATCGCGGGCGGTATTGGTATCACCCCTTTCCTGTCGCACATGGCAGAGC TGCAACACAGCGACGTCGACTGGCAGCTACATTACTGCTCGCGAAATCCAGAAAGTTGCGCATTTCGTGATGAGCTAGTC CAGCATCCGCAGGCTGAGAAAGTTCACTTGCATCACTCATCAACCGGAACACGACTGGAATTAGCGCGATTATTGGCGGA TATCGAACCTGGCACACACGTTTATACCTGTGGTCCCGAGGCGCTAAATGAAGCGGTAAGAAGTGAAGCTGCGCGTCTGG ACATCGTCGCCGATACGCTGCACTTTGAGCAATTTGCTATCGAAGACAAAACCGGCGATGCCTTTACCCTGGTGCTTGCC CGTTCCGGAAAAGAGTTTGTGGTGCCGGAAGAGATGACTATTTTGCAGGTTATTGAAAATAATAAAGCCGCGAAAGTGGA ATGTTTATGTCGTGAAGGGGTATGCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAGTATT TTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGAT TTGTAG
Upstream 100 bases:
>100_bases ATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTG ATTTTTGATGGAGTACAGCA
Downstream 100 bases:
>100_bases TTTGCCAAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATT GTGTAATGCTTCCGCCATCA
Product: putative dioxygenase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENS RGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIVADTLHFEQFAIEDKTGDAFTLVLA RSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLD L
Sequences:
>Translated_321_residues MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENS RGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIVADTLHFEQFAIEDKTGDAFTLVLA RSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLD L >Mature_320_residues SDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSR GGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQ HPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIVADTLHFEQFAIEDKTGDAFTLVLAR SGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL
Specific function: Unknown
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=321, Percent_Identity=99.0654205607477, Blast_Score=663, Evalue=0.0, Organism=Escherichia coli, GI1787098, Length=322, Percent_Identity=26.7080745341615, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1787658, Length=320, Percent_Identity=23.125, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35705; Mature: 35573
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSL CCCCEEEEEEHHHCCHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHH LSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAG HCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEC GIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLE CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHH LARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIVADTLHFEQFAIEDKTGDAFTLVLA HHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEEEEEHHHHHHHEEEECCCCCEEEEEEE RSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERA ECCCEEECCCCHHEEEEHHCCCCCEEEEEECCCCCCCCHHEEECCCCCCCCCCCCCHHHH SQQSMLICCSRAKGKRLVLDL HHHCEEEEECCCCCCEEEEEC >Mature Secondary Structure SDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSL CCCEEEEEEHHHCCHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHH LSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAG HCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEC GIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLE CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHH LARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIVADTLHFEQFAIEDKTGDAFTLVLA HHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEEEEEHHHHHHHEEEECCCCCEEEEEEE RSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERA ECCCEEECCCCHHEEEEHHCCCCCEEEEEECCCCCCCCHHEEECCCCCCCCCCCCCHHHH SQQSMLICCSRAKGKRLVLDL HHHCEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]