Click here to switch to the map view.

The map label for this gene is ydjY

Identifier: 218695309

GI number: 218695309

Start: 1982548

End: 1983225

Strand: Direct

Name: ydjY

Synonym: EC55989_1919

Alternate gene names: 218695309

Gene position: 1982548-1983225 (Clockwise)

Preceding gene: 218695308

Following gene: 218695310

Centisome position: 38.46

GC content: 48.67

Gene sequence:

>678_bases
ATGTCGCAACATTATTCAGTGTCATGGAAAAAAGGACTGGCTGCACTCTGCTTACTGGCTGTTGCCGGGCTTAGCGGCTG
CGATCAAAAAGAGAATGCGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGTGTCGATGCCAATA
ACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGATGACACTCGTCACGGTATTGTGTTTAAAGAT
GGCTCCAACGGACATAAATCGCTGTTTATGGGTTATGCAACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGG
TACGCCGGGCGAAAACATGACGATGGATAATAAAGAAACGACTCATGTCACAGGTAGCAAACTGGATATTTCGGTCAACT
GGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGC
GGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGTTGCCTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAA
TGCAACATACACTTATGGTGCGGTGGAAAAACGCGGCGAAGTGAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATA
ACACGCTGGCAACGGTTACCTTTAAAATCACCGAATAA

Upstream 100 bases:

>100_bases
CTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCC
AAAAAATGAAGGATAGAACG

Downstream 100 bases:

>100_bases
AGCAGGATAAAGGATGATGAAGATGCAATCGCGTAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTA
TGCTGCTGGCATGGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE

Sequences:

>Translated_225_residues
MSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
>Mature_224_residues
SQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDG
SNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGG
NLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI87081965, Length=225, Percent_Identity=98.6666666666667, Blast_Score=462, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24129; Mature: 23998

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC
>Mature Secondary Structure 
SQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]