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The map label for this gene is ydjR

Identifier: 218695300

GI number: 218695300

Start: 1972794

End: 1973369

Strand: Reverse

Name: ydjR

Synonym: EC55989_1910

Alternate gene names: 218695300

Gene position: 1973369-1972794 (Counterclockwise)

Preceding gene: 218695301

Following gene: 218695297

Centisome position: 38.28

GC content: 51.39

Gene sequence:

>576_bases
ATGGAATACTTTGATATGCGTAAAATGTCGGTGAATCTGTGGCGAAATGCTGCCGGTGAAACGCGCGAAATTTGCACTTT
CCCACCGGCAAAACGTGATTTTTACTGGCGTGCCAGCATTGCATCCATCGCGGCGAATGGGGAGTTTTCTTTGTTTCCCG
GCATGGAAAGGATAGTGACGTTGCTGGAAGGCGGCGAGATGCTCCTTGAAAGCGCAGACCGCTTTAACCATACCTTAAAA
CCGTTACAGCCTTTTGCCTTTGCAGCGGACCAGGTGGTAAAAGCGAAACTGACGGCAGGGCAGATGTCGATGGATTTCAA
CATCATGACACGCCTGGATGTCTGTAAGGCGAAAGTCAGAATTGCCGAACGTACGTTTACTACCTTTGGCTCATGCGGCG
GGGTGGTGTTTGTGATTAACGGGGCGTGGCAACTGGGCGATAAATTGCTCACTACCGACCAGGGCGCGTGCTGGTTCGAT
GGCAGGCACACCCTGCGGCTTTTACAACCGCAAGGTAAACTGTTGTTCAGTGAAATCAACTGGCTCGCTGGTCATTCGCC
GGATCAAGTTCAGTAA

Upstream 100 bases:

>100_bases
AAAAAAGCCTGATCACCACTAACGTAAATCACCCGAGTTGCCGATAACCATCCACGGTTACCTGAACGATAACAATGAAA
AGAACGGGCCGGGAGCGAGT

Downstream 100 bases:

>100_bases
TTTCATAGTTACCGGAAAGCAGCGGCTTACAAAGAATTTTATAACCGTCGTGATCAAACCCGGCGGGTGTCCGAATTAAC
GTTGTCGCTTCTTCCAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLK
PLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSCGGVVFVINGAWQLGDKLLTTDQGACWFD
GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ

Sequences:

>Translated_191_residues
MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLK
PLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSCGGVVFVINGAWQLGDKLLTTDQGACWFD
GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ
>Mature_191_residues
MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLK
PLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSCGGVVFVINGAWQLGDKLLTTDQGACWFD
GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ves family [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=191, Percent_Identity=98.9528795811518, Blast_Score=393, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 21490; Mature: 21490

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVT
CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEHHHHHHHCCCCEEECCCHHHHHH
LLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVR
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHH
IAERTFTTFGSCGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEIN
HHHHHHHHHCCCCCEEEEEECCHHHCCEEEECCCCCEEECCCCEEEEECCCCCEEHHHHH
WLAGHSPDQVQ
HHCCCCCCCCC
>Mature Secondary Structure
MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVT
CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEHHHHHHHCCCCEEECCCHHHHHH
LLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVR
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHH
IAERTFTTFGSCGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEIN
HHHHHHHHHCCCCCEEEEEECCHHHCCEEEECCCCCEEECCCCEEEEECCCCCEEHHHHH
WLAGHSPDQVQ
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA