Definition Escherichia coli 55989, complete genome.
Accession NC_011748
Length 5,154,862

Click here to switch to the map view.

The map label for this gene is xis

Identifier: 218695139

GI number: 218695139

Start: 1798719

End: 1798970

Strand: Direct

Name: xis

Synonym: EC55989_1740

Alternate gene names: NA

Gene position: 1798719-1798970 (Clockwise)

Preceding gene: 218695138

Following gene: 218695140

Centisome position: 34.89

GC content: 44.44

Gene sequence:

>252_bases
ATGAGCGAAGTAATCATGATTGTCTCTCCCGGCAAATGGGTATCCGAAGAGCAGTTAATTGCGCTGAAAGGAATAAAAAA
AGGTACGTTAAAAAAGGCCCGGGAAAAATCGTTTATGGAAGGAAGGGAATATAAGCATGTCGCTCATGACGGTATGCCAT
GGGATAACAGTCCATGCTTTTACAACCTGGAAGAAATTGATCGCTGGATTGAGCGCCAGGCATCAGCGAGACCAAGACGT
CATCTTACTTGA

Upstream 100 bases:

>100_bases
ACTGATCCCGAGTCAGGCTGATTCTTAATGTTCAACTGTCGCCGGTTGTGACTGGTATTCTGCAACCGGCGCTCGTCTGA
TGTAAGAGATAAAGAAATCG

Downstream 100 bases:

>100_bases
CTAAAAGCCACACTAACTAATGAGAGAAGTTGAAATGAAATATCCGACAGGCGTGGAAAACCATGGAGGGAAATTACGTA
TCTGGTTTGTTTATAAAGGC

Product: prophage excisionase

Products: NA

Alternate protein names: Phage Excisionase

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRR
HLT

Sequences:

>Translated_83_residues
MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRR
HLT
>Mature_82_residues
SEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRRH
LT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9742; Mature: 9611

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCF
CCCEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCE
YNLEEIDRWIERQASARPRRHLT
EEHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCF
CCEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCE
YNLEEIDRWIERQASARPRRHLT
EEHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA