| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is xis
Identifier: 218695139
GI number: 218695139
Start: 1798719
End: 1798970
Strand: Direct
Name: xis
Synonym: EC55989_1740
Alternate gene names: NA
Gene position: 1798719-1798970 (Clockwise)
Preceding gene: 218695138
Following gene: 218695140
Centisome position: 34.89
GC content: 44.44
Gene sequence:
>252_bases ATGAGCGAAGTAATCATGATTGTCTCTCCCGGCAAATGGGTATCCGAAGAGCAGTTAATTGCGCTGAAAGGAATAAAAAA AGGTACGTTAAAAAAGGCCCGGGAAAAATCGTTTATGGAAGGAAGGGAATATAAGCATGTCGCTCATGACGGTATGCCAT GGGATAACAGTCCATGCTTTTACAACCTGGAAGAAATTGATCGCTGGATTGAGCGCCAGGCATCAGCGAGACCAAGACGT CATCTTACTTGA
Upstream 100 bases:
>100_bases ACTGATCCCGAGTCAGGCTGATTCTTAATGTTCAACTGTCGCCGGTTGTGACTGGTATTCTGCAACCGGCGCTCGTCTGA TGTAAGAGATAAAGAAATCG
Downstream 100 bases:
>100_bases CTAAAAGCCACACTAACTAATGAGAGAAGTTGAAATGAAATATCCGACAGGCGTGGAAAACCATGGAGGGAAATTACGTA TCTGGTTTGTTTATAAAGGC
Product: prophage excisionase
Products: NA
Alternate protein names: Phage Excisionase
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRR HLT
Sequences:
>Translated_83_residues MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRR HLT >Mature_82_residues SEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRRH LT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9742; Mature: 9611
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCF CCCEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCE YNLEEIDRWIERQASARPRRHLT EEHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCF CCEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCE YNLEEIDRWIERQASARPRRHLT EEHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA