Click here to switch to the map view.

The map label for this gene is dicA

Identifier: 218695133

GI number: 218695133

Start: 1793910

End: 1794317

Strand: Direct

Name: dicA

Synonym: EC55989_1734

Alternate gene names: 218695133

Gene position: 1793910-1794317 (Clockwise)

Preceding gene: 218695121

Following gene: 218695134

Centisome position: 34.8

GC content: 45.34

Gene sequence:

>408_bases
ATGGATACAAGAACCCTAGGCCAGCGAGTTCTGGCGCGACGAAAAGAATTACGCTTAACACAACGAGAAGCTGCGCGCCT
CGCTGGAGTTGCTCACGTCACAATTTCACAATGGGAAAGAGACGAAACCCAGCCAGTCGGAAAACGATTGTTTGCTTTAG
CGGATGCTTTGAAGTGCTCACCTACATGGCTAATGTTTGGTGACGAAGACAAGGCACCAGTGCCTGCACAAGAACTTCAT
GTGGAAACAGAGCTAACTCCCAACCACAAAGAATTGATCGAATTATTCGATGCTCTTCCATCTTCCGAGCAGGAAGCCTT
GCTGTCTGAAATGCGCGCAAGAGTAGAAAACTTCAACAAACTCTTCGAAGAAATGCTTAAAGCGCGTAAAAATAAATCAA
TAAAATAA

Upstream 100 bases:

>100_bases
ATTGCGTCAACTTTAAGCATCAAAGCCCCCTCTTGTTAGACTTTTCTAACATTATTGTGCGCGGGATACCTAAGTCAAGA
AAAATTAGAATTACCTAACT

Downstream 100 bases:

>100_bases
CATTCTTTTCAAGTGATTAGTTGCGCCCACTCTTTTTGTTAGACCAATCTAACAAAAAACACTTGCCTCTCATGTTAGGT
TATTCTAAATTACTTTCCAT

Product: transcriptional repressor DicA

Products: NA

Alternate protein names: Repressor protein of division inhibition gene dicA [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDTRTLGQRVLARRKELRLTQREAARLAGVAHVTISQWERDETQPVGKRLFALADALKCSPTWLMFGDEDKAPVPAQELH
VETELTPNHKELIELFDALPSSEQEALLSEMRARVENFNKLFEEMLKARKNKSIK

Sequences:

>Translated_135_residues
MDTRTLGQRVLARRKELRLTQREAARLAGVAHVTISQWERDETQPVGKRLFALADALKCSPTWLMFGDEDKAPVPAQELH
VETELTPNHKELIELFDALPSSEQEALLSEMRARVENFNKLFEEMLKARKNKSIK
>Mature_135_residues
MDTRTLGQRVLARRKELRLTQREAARLAGVAHVTISQWERDETQPVGKRLFALADALKCSPTWLMFGDEDKAPVPAQELH
VETELTPNHKELIELFDALPSSEQEALLSEMRARVENFNKLFEEMLKARKNKSIK

Specific function: This protein is a repressor of division inhibition gene dicB [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787853, Length=132, Percent_Identity=56.8181818181818, Blast_Score=156, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15511; Mature: 15511

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRTLGQRVLARRKELRLTQREAARLAGVAHVTISQWERDETQPVGKRLFALADALKCS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
PTWLMFGDEDKAPVPAQELHVETELTPNHKELIELFDALPSSEQEALLSEMRARVENFNK
CCEEEECCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LFEEMLKARKNKSIK
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTRTLGQRVLARRKELRLTQREAARLAGVAHVTISQWERDETQPVGKRLFALADALKCS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
PTWLMFGDEDKAPVPAQELHVETELTPNHKELIELFDALPSSEQEALLSEMRARVENFNK
CCEEEECCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LFEEMLKARKNKSIK
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3532030; 9097039; 9278503; 2836697 [H]