| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218695102
Identifier: 218695102
GI number: 218695102
Start: 1771632
End: 1772450
Strand: Reverse
Name: 218695102
Synonym: EC55989_1701
Alternate gene names: NA
Gene position: 1772450-1771632 (Counterclockwise)
Preceding gene: 218695103
Following gene: 218695101
Centisome position: 34.38
GC content: 54.82
Gene sequence:
>819_bases GTGATAATGAGATGGCCACCTGGGCGATGGCGGAAATCACGTACCAGATCACGTACACGAATTAAGGAGGTGGCAATGAC CACACCAAATCCACTGGCAAAAACGAAAGGTGCGGGAACGACGTTCTGGATGTACACCGGCAAGGGCGATGCGTTTGCGA ACCCTTTATCGGACACTGACTGGCTGCGTCTTGCGATGGTGAAGGATCTGCAGCCTGGCGAAATGACCGCTGATGCAGAA GATGACACTTATCTCGATGATGAAGATGCAGACTGGAAAACGACAACCCAGGGGCAGAAATCCGTCGGTGATACTTCGGC GACGCTGGCCTGGCGTCCGGGTGACAGCGGGCAGAAAAAACTGGTTCAGTTGTTCGACGCCGGTGAAGTCTGCGCGTTTC GTATCAAATATCCCAACGGTACTGTTGATGTTTTCCGTGGCTGGCTGAGTTCACTGGGTAAAACCATTGCCTCAAAAGAC GTGATGACCCGCACAGTGAAAATCAGCGGTGTGGGGCGTCCGTATCTGGCAGAAGAAGGTACTGAAACCGTGGGCGTTAC CGGGCTGACGGTGGCACCGGCATCTGCCAGTGTAAAAGTGGGAGCAACCACCACGCTGACCTTTACAGTAAAACCTGACG GAGCCAGTGACAAAGCGATCAGTGTGCATTCGACAGATCCACAGACTGCCACGGTGACCCTGAACGGGCTTGTGGCCACG GTGAAAGGCGTGAAGCAGGGCAGTGTCAGCATTGTGGGCATGACTTCTGACGGCGATTTTGTGGCAGTGGCTGCGGTGGC TGTCAGCGCAGCAGGTTAA
Upstream 100 bases:
>100_bases GATATGTGGATGGAGAGCACCATTTTCCCGGCCCTGAATGATGTACCGGCACTTTCCGGACTCATCGACACCCTGATCCC ACTCGGTTTTAACTATCAAC
Downstream 100 bases:
>100_bases CAGGACGATACTCATCATTTGCCCCGGTTATCCGGGGCTTTTTTGCAGGTGGAGAACATGATGTTTCTGAAACAGGGCAC GTTTAATTATGAAAAGCAGT
Product: Major tail protein V
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein; Tail Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAE DDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDAGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKD VMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT VKGVKQGSVSIVGMTSDGDFVAVAAVAVSAAG
Sequences:
>Translated_272_residues MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAE DDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDAGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKD VMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT VKGVKQGSVSIVGMTSDGDFVAVAAVAVSAAG >Mature_272_residues MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAE DDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDAGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKD VMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT VKGVKQGSVSIVGMTSDGDFVAVAAVAVSAAG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28803; Mature: 28803
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCC WLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKK CEEEEEHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH LVQLFDAGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEG HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC TETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT CCEEEEEEEEECCCCCEEEECCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEE VKGVKQGSVSIVGMTSDGDFVAVAAVAVSAAG ECCCCCCCEEEEEECCCCCEEEEEEEEEECCC >Mature Secondary Structure MIMRWPPGRWRKSRTRSRTRIKEVAMTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCC WLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKK CEEEEEHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH LVQLFDAGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEG HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC TETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVAT CCEEEEEEEEECCCCCEEEECCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEE VKGVKQGSVSIVGMTSDGDFVAVAAVAVSAAG ECCCCCCCEEEEEECCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA