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The map label for this gene is yddK [H]

Identifier: 218695009

GI number: 218695009

Start: 1657100

End: 1658431

Strand: Reverse

Name: yddK [H]

Synonym: EC55989_1602

Alternate gene names: 218695009

Gene position: 1658431-1657100 (Counterclockwise)

Preceding gene: 218695010

Following gene: 218695008

Centisome position: 32.17

GC content: 33.18

Gene sequence:

>1332_bases
ATGATCACTGACCTTATATTACACAATCATCCCAGGATGAAAACAATCACTTTAAACGACAACCATATTGCACATTTAAA
CGCCAAAAACACTACAAAACTGGAATATTTAAACTTAAGCAATAACAATTTACTGCCAACCAATGACATTGATCAACTAA
TATCATCAAAACATCTTTGGCATGTATTAGTTAACGGCATCAACAATGATCCACTTGCACAAATGCAGTACTGGACTGCA
GTAAGAAATATAATTGATGACACTAATGAAGTGACCATTGATTTATCAGGACTTAATTTAACCACTCAACCACCAGGGCT
GCAAAACTTCACCTCTATCAATCTTGATAATAACCAACTCACACATTTTGATGCAACCAACTACGATAGACTCGTAAAGC
TAAGTCTGAATAGTAATACTCTTGACTCAATAAATTTTCCTCAAGGCAGAAATGTAAGTATTACACATATATCTATGAAT
AATAATGCTCTCAGAAATATTGATATAGATAGGCTTTCATCAGTTACTTATTTTAGTGCGGCACATAATCAACTAGAGTT
TGTGCAATTAGAATCTTGCGAATGGCTGCAATACCTGAATCTCAGCCATAATCAATTAACTGATATTGTTGCAGGTAATA
AAAATGAACTCTTACTGCTGGATCTATCCCATAATAAACTAACAAGTTTACACAATGACTTATTTCCCAACTTGAATACG
TTACTTATTAACAACAATTTGCTTTCTGAAATTAAAATATTCTATAGCAACTTCTGCAATGTTCAGACATTAAACGCTGC
TAACAACCAGTTGAAATATATAAATCTTGATTTCCTGACTTATCTTCCATCTATCAAAAGTTTAAGACTGGACAATAATA
AAATAACCCACATTGATACTAATAATACATCCGATATTGGAACTTTATTCCCCATAATAAAACAGAGCAAAAACTTAAAT
TTTTTAAATGTTTCTGGGAAGAACAATTGCCCTACTATGCAGCTCATGTTATTTAATTTGTTTTCCCCAGCACTTAAGCT
TAATACTGGCCTGGCAATTCTTTCGCCTGGTGCATTTGAAGTTCACTCTGACGGAATAGATGTGGATAACGAATTGTTTC
ACTATCCTATTAAAAAAGCATATACCCCATATAATATACACACTTACAAGACAGAGGAAGTTGTAAACCAGAGGAATATA
AAAGTTAAAAACATGACCTTAGATGAAATAAACAATACTTACTGTAATAACGATTATTACAATCAGGCAATAAGAGAGGA
ACCGATAGACCTTCTGGACAGATCGTTTTCCTCCAGTTCATGGCCTTTTTAG

Upstream 100 bases:

>100_bases
TTGGTTTTGGTCACTGGGAATATGATTTTAAAGGCTATAACGATGAAGCCAACGGCTCGCGCGGCAAGAATCTCTGATTG
AGTTAAGTGCCCATCACAAT

Downstream 100 bases:

>100_bases
TGAATAAATCATCACTAATTCTATAAGTGTCTGGTCTTGTTGATAATATAGTTAATATGTAACCCTTTAGATTCACGATC
TGAAGGGTTGAAACATGACA

Product: conserved hypothetical protein, putative glycoprotein with ribonuclease inhibitor domain (yddK) (modular protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTA
VRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNTLDSINFPQGRNVSITHISMN
NNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNT
LLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLN
FLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQRNI
KVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF

Sequences:

>Translated_443_residues
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTA
VRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNTLDSINFPQGRNVSITHISMN
NNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNT
LLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLN
FLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQRNI
KVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF
>Mature_443_residues
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTA
VRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNTLDSINFPQGRNVSITHISMN
NNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNT
LLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLN
FLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQRNI
KVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 LRR (leucine-rich) repeats [H]

Homologues:

Organism=Escherichia coli, GI1787744, Length=111, Percent_Identity=99.0990990990991, Blast_Score=232, Evalue=3e-62,
Organism=Drosophila melanogaster, GI281362655, Length=303, Percent_Identity=23.7623762376238, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281362657, Length=303, Percent_Identity=23.7623762376238, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281362653, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24650334, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24650332, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24650330, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281362651, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI62472958, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI116007092, Length=303, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 50618; Mature: 50618

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLW
CCEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEE
HVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQL
EHEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCEE
THFDATNYDRLVKLSLNSNTLDSINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSA
EEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEECCHHHHCCEEEEHH
AHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNT
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE
LLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDT
EEEECCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEHHHHHCCCHHEEEECCCEEEEEEC
NNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFE
CCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHEECCCEEEECCCCEE
VHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQRNIKVKNMTLDEINNTYCNNDYY
EECCCCCCCCHHEECCHHHCCCCCEEEEEEHHHHHCCCCEEEEEEEHHHCCCCCCCCHHH
NQAIREEPIDLLDRSFSSSSWPF
HHHHHHCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLW
CCEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEE
HVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQL
EHEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCEE
THFDATNYDRLVKLSLNSNTLDSINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSA
EEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEECCHHHHCCEEEEHH
AHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNT
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE
LLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDT
EEEECCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEHHHHHCCCHHEEEECCCEEEEEEC
NNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFE
CCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHEECCCEEEECCCCEE
VHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQRNIKVKNMTLDEINNTYCNNDYY
EECCCCCCCCHHEECCHHHCCCCCEEEEEEHHHHHCCCCEEEEEEEHHHCCCCCCCCHHH
NQAIREEPIDLLDRSFSSSSWPF
HHHHHHCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]