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The map label for this gene is yddH

Identifier: 218695001

GI number: 218695001

Start: 1645998

End: 1646567

Strand: Reverse

Name: yddH

Synonym: EC55989_1593

Alternate gene names: 218695001

Gene position: 1646567-1645998 (Counterclockwise)

Preceding gene: 218695003

Following gene: 218694995

Centisome position: 31.94

GC content: 51.93

Gene sequence:

>570_bases
ATGAGCCGATTCATCCCCATAGAATTACACCATGCCAGCCGTCTATTAAATCATGGCCCAACTGTCATGATCACCAGTTT
CGATGAGCAATCCCAGCGGCGTAACATTATGGCTGCAGCCTGGTCAATGCCGGTGGAGTTTGAACCGCCACGCGTGGCGA
TTGTGGTAGATAAATCGACATGGACCAGGGAGTTGATTGAACGTAACGGTAAGTTTGGCATCGTTATCCCGGGCGTTGCA
GCAACTAACTGGACGTGGGCAGTGGGAAGCGTGTCGGGTCGTGAAGAAGATAAATTTAATTGCTATGGCATTCCGGTGGT
GAAAGGTCCGGTGCTTGGTTTGCCACTTGTTGAAGAGAAATGCCTGGCGTGGATGGAGTGCCGCCTGCTACCTGCGACTT
CTGCGCAACAAAAATACGACACGCTGTTTGGCGAGGTGGTATCAGCAGCGGCAGACGCACGGGTATTTGTCGAAGGCCGC
TGGCAGTTTGATGATGATAAGCTCAATACGTTGCATCATTTAGGTGCTGGCACGTTTGTTACCAGCGGCAAGCGAGTTAC
GGCGGGTTAA

Upstream 100 bases:

>100_bases
GCGGACATGCATCACGTTTGCAAATCGCCAATCCCGTTAATTTCGTTACTTATTGCGTTACGGACTACGCTTAAAAAAAC
CTTCTTCACGAGGCGATACC

Downstream 100 bases:

>100_bases
GCATTACATGCTGTAACCGGGTTTCTTTATCAAAGCCTCCATTTGGGGCGCGATTTCGGCATCCCAGATAGCTTGCCAAG
ATTCTGGTTGAATCTGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVA
ATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGR
WQFDDDKLNTLHHLGAGTFVTSGKRVTAG

Sequences:

>Translated_189_residues
MSRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVA
ATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGR
WQFDDDKLNTLHHLGAGTFVTSGKRVTAG
>Mature_188_residues
SRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVAA
TNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGRW
QFDDDKLNTLHHLGAGTFVTSGKRVTAG

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=189, Percent_Identity=96.2962962962963, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20954; Mature: 20823

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKST
CCCEEEEEEHHHHHHHHCCCEEEEEECCCHHHHCCEEEEEECCCEEECCCEEEEEEECCH
WTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEK
HHHHHHHCCCCEEEEECCCEECCCEEEEECCCCCCCCCEEEEECCEECCCCCCCCHHHHH
CLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFV
HHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCEEE
TSGKRVTAG
ECCEEEECC
>Mature Secondary Structure 
SRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKST
CCEEEEEEHHHHHHHHCCCEEEEEECCCHHHHCCEEEEEECCCEEECCCEEEEEEECCH
WTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEK
HHHHHHHCCCCEEEEECCCEECCCEEEEECCCCCCCCCEEEEECCEECCCCCCCCHHHHH
CLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFV
HHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCEEE
TSGKRVTAG
ECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]