Click here to switch to the map view.

The map label for this gene is yncE

Identifier: 218694994

GI number: 218694994

Start: 1633139

End: 1634200

Strand: Direct

Name: yncE

Synonym: EC55989_1585

Alternate gene names: 218694994

Gene position: 1633139-1634200 (Clockwise)

Preceding gene: 218694992

Following gene: 218694996

Centisome position: 31.68

GC content: 50.19

Gene sequence:

>1062_bases
ATGCATTTACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGCTTCATCATTCAG
TACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAATGGCTTATAGCCAGCAAGAAAACG
CTCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGCGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAA
GTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGTCACCATCAATAACACGACTCAGACACTGTGGTTTGGTAA
CACTGTAAACAGCGCGGTCACGGCGATAGATGCCAAAACGGGCGAGGTGAAAGGCCGTCAGGTGCTGGATGATCGTAAGC
GTACGGAAGAGGTGCGCCCGCTGCAACCGCGTGAGCTGGTAGCTGACGATGCCACGAACACCGTTTACATCAGTGGTATT
GGTAAAGAGAGCGTGATTTGGGTCGTTGATGGCGAGAATATCAAACTGAAAACCGCCATCCAGAACACCGGTAAAATGAG
TACCGGTCTGGCGCTGGATAGCAAAGGCAAACGTCTTTACACCACTAACGCTGACGGCGAATTGATTACCATCGACACCG
CCGACAATAAAATCCTCAGCCGTAAAAAGCTGCTGGATGACGGCAAAGAGCACTTCTTTATCAACATTAGCCTTGATACC
GCCAGGCAGCGTGCATTTATCACCGATTCTAAAGCCGCAGAAGTGTTAGTGGTCGATACCCGTAATGGCAATATTCTGGC
GAAGGTTGCGGCACCAGAATCACTGGCTGTGCTGTTTAACCCAGCGCGTAATGAAGCCTACGTAACGCATCGTCAGGCAG
GTAAAGTCAGTGTGATTGACGCGAAAAGCTATAAAGTGGTGAAAACGTTCGATACGCCGACTCATCCAAACAGCCTGGCG
CTGTCTGCCGATGGCAAAACGCTGTATGTCAGTGTGAAACAAAAATCCACTAAACAGCAGGAAGCTACCCAGCCAGACGA
TGTGATTCGTATTGCGCTGTAA

Upstream 100 bases:

>100_bases
AATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATTG
GTTCATCAAAGGGAGTCGTC

Downstream 100 bases:

>100_bases
TAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAA
TTTGCCCGGCACGTAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
VTQAIHNDLKPFGVTINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRQVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA
LSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL

Sequences:

>Translated_353_residues
MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
VTQAIHNDLKPFGVTINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRQVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA
LSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
>Mature_353_residues
MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
VTQAIHNDLKPFGVTINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRQVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA
LSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=353, Percent_Identity=98.5835694050991, Blast_Score=709, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR015943 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38699; Mature: 38699

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS
CCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCEEEEEEC
QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGVTINNTTQTLWFGNTVNSAVTAIDAKT
CCCCCCCCCEEEEECCCEEEHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCC
GEVKGRQVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGENIKLKTAI
CCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEE
QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
CCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECC
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCEEEEEE
AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
CCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS
CCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCEEEEEEC
QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGVTINNTTQTLWFGNTVNSAVTAIDAKT
CCCCCCCCCEEEEECCCEEEHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCC
GEVKGRQVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGENIKLKTAI
CCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEE
QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
CCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECC
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCEEEEEE
AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
CCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]