Click here to switch to the map view.

The map label for this gene is ydbL

Identifier: 218694929

GI number: 218694929

Start: 1563345

End: 1563671

Strand: Direct

Name: ydbL

Synonym: EC55989_1519

Alternate gene names: 218694929

Gene position: 1563345-1563671 (Clockwise)

Preceding gene: 218694928

Following gene: 218694931

Centisome position: 30.33

GC content: 44.34

Gene sequence:

>327_bases
ATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGC
CAGAACTCAGGGGCGGGTAGGTGAAACATTTTATGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAG
TAACCGACATTAATGCCGAACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATCGCG
AAACTCGCCGGGCAAAAGCTCGTAGCTCGGGCCAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTGCGAAA
ATTTTAA

Upstream 100 bases:

>100_bases
ATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAG
CGATCTTTTCTGAGGCGATG

Downstream 100 bases:

>100_bases
TAGCAAAACCGCAATATCGGGATAATGCTACAGGAGAAAGCGATTGATCTATTTTCCTGAAACAAGGTGAATATTAAAAA
ACTCCTGTTAAATTGCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIA
KLAGQKLVARAKPGEYVQGINGKWVRKF

Sequences:

>Translated_108_residues
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIA
KLAGQKLVARAKPGEYVQGINGKWVRKF
>Mature_108_residues
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIA
KLAGQKLVARAKPGEYVQGINGKWVRKF

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=108, Percent_Identity=99.0740740740741, Blast_Score=218, Evalue=9e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008309 [H]

Pfam domain/function: PF07027 DUF1318 [H]

EC number: NA

Molecular weight: Translated: 11908; Mature: 11908

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAE
CCHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCH
RKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEECC
>Mature Secondary Structure
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAE
CCHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCH
RKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]