BacMap

Definition	Escherichia coli 55989, complete genome.
Accession	NC_011748
Length	5,154,862

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The map label for this gene is dbpA

Identifier: 218694919

GI number: 218694919

Start: 1550037

End: 1551410

Strand: Direct

Name: dbpA

Synonym: EC55989_1509

Alternate gene names: 218694919

Gene position: 1550037-1551410 (Clockwise)

Preceding gene: 218694918

Following gene: 218694924

Centisome position: 30.07

GC content: 51.6

Gene sequence:

>1374_bases
GTGACCGCTTTTTCTACCCTGAATGTTTTGCCTCCCGCCCAACTCACGAACCTTAATGAGTTGGGTTATTTAACCATGAC
GCCGGTGCAGGCCGCCGCGCTTCCGGCGATCCTTGCCGGAAAAGATGTTCGCGTGCAGGCGAAAACCGGCAGCGGCAAAA
CGGCGGCTTTTGGCCTCGGCTTGTTACAGCAAATTGATGCGTCGCTATTTCAAACCCAGGCTTTAGTGCTGTGTCCTACG
CGTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTCCCAAATACCAAAATTTTGACGTTGTG
CGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGTCGTTTGC
TGGCTCACTTGCAAAAAGGCACGATATCACTGGATGCGCTGAATACTTTGGTGATGGATGAGGCCGACCGCATGCTGGAT
ATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCAGCATCTCGACAGACGCTTCTGTTTTCTGCAACCTG
GCCGGAAGCCATCGCCGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAGATGCTTTGC
CACCCATTGAACAACAATTTTATGAGACATCCAGTAAAGGCAAAATTCCTCTGTTGCAACGGTTATTAAGCTTGCATCAG
CCATCCTCTTGTGTGGTGTTTTGCAATACCAAAAAAGATTGCCAGGCTGTCTGCGACGCGCTGAATGAAGTAGGGCAAAG
TGCATTGTCGTTACACGGCGATCTGGAACAACGCGATCGCGATCAGACCCTGGTACGTTTTGCTAACGGTAGCGCCCGTG
TACTGGTTGCGACTGATGTTGCTGCGCGTGGTCTGGATATTAAATCGCTTGAGCTGGTGGTGAACTTTGAGCTGGCGTGG
GACCCTGAAGTTCATGTACATCGCATCGGTCGTACAGCTCGTGCAGGAAATAGCGGTCTGGCGATCAGTTTCTGTGCTCC
GGAAGAAGCACAGCGGGCCAATATCATTTCTGACATGTTGCAGATAAAACTTAACTGGCAAACGCCGCCAGCTAATAGTT
CCATTTTGCCGCTGGAAGCAGAAATGGCAACGTTGTGTATCGATGGCGGGAAAAAAGCCAAAATGCGCCCGGGTGATGTA
TTAGGTGCGCTGACAGGAGACATCGGGCTTGATGGCGTAGATATTGGCAAAATCGCCGTGCATCCGGCGCATGTCTATGT
CGCGGTGCGTCAGGCTGTTGCTCATAAAGCATGGAAACAGTTACAGGGCGGGAAGATTAAAGGAAAAACGTGCCGGGTGC
GGTTATTAAAATAA

Upstream 100 bases:

>100_bases
CACCACCTGATGAAGAACCGATTAAATTGTCGCATCGTGAGCGTAGATCTGCGAGGATACGCGCCTGCTAACTTTGCGTC
GATGACCACGAGAATAGATT

Downstream 100 bases:

>100_bases
TGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATGCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGG
CCTCCATAAGAGTAGCCCGA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLAHLQKGTISLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAW
DPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSILPLEAEMATLCIDGGKKAKMRPGDV
LGALTGDIGLDGVDIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Sequences:

>Translated_457_residues
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLAHLQKGTISLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAW
DPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSILPLEAEMATLCIDGGKKAKMRPGDV
LGALTGDIGLDGVDIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
>Mature_456_residues
TAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTR
ELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLAHLQKGTISLDALNTLVMDEADRMLDM
GFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQP
SSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWD
PEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSILPLEAEMATLCIDGGKKAKMRPGDVL
GALTGDIGLDGVDIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=37.1657754010695, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=34.0974212034384, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=31.0055865921788, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI224593278, Length=383, Percent_Identity=36.2924281984334, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=36.676217765043, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=36.5921787709497, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI21071032, Length=350, Percent_Identity=36.8571428571429, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI45446747, Length=348, Percent_Identity=35.9195402298851, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI45446743, Length=348, Percent_Identity=35.9195402298851, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI262118318, Length=399, Percent_Identity=36.3408521303258, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=37.8016085790885, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=37.8016085790885, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=37.8016085790885, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI262231852, Length=399, Percent_Identity=36.3408521303258, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI216548263, Length=399, Percent_Identity=36.3408521303258, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI13518015, Length=399, Percent_Identity=36.3408521303258, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=34.2857142857143, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI21040371, Length=381, Percent_Identity=30.4461942257218, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4758112, Length=381, Percent_Identity=30.4461942257218, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI18375623, Length=381, Percent_Identity=30.4461942257218, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI148613856, Length=372, Percent_Identity=34.4086021505376, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI38201710, Length=372, Percent_Identity=34.4086021505376, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4758138, Length=349, Percent_Identity=34.9570200573066, Blast_Score=201, Evalue=8e-52,
Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=34.3007915567282, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI38327634, Length=361, Percent_Identity=36.01108033241, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=34.435261707989, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI13129006, Length=347, Percent_Identity=34.8703170028818, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=33.9031339031339, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=33.8068181818182, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI188035877, Length=344, Percent_Identity=36.3372093023256, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=34.375, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=34.375, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI41327779, Length=397, Percent_Identity=32.4937027707809, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=30.7692307692308, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI13514831, Length=379, Percent_Identity=34.0369393139842, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI256223453, Length=364, Percent_Identity=32.1428571428571, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI41327776, Length=348, Percent_Identity=33.0459770114943, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=31.0991957104558, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI6005743, Length=347, Percent_Identity=31.4121037463977, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI8922886, Length=347, Percent_Identity=31.4121037463977, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI62241022, Length=336, Percent_Identity=31.547619047619, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI9506931, Length=391, Percent_Identity=29.156010230179, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=30.6413301662708, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI62241024, Length=359, Percent_Identity=30.9192200557103, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=28.133704735376, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=28.133704735376, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=28.698224852071, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI256773275, Length=357, Percent_Identity=32.4929971988796, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=32.4675324675325, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI154759257, Length=400, Percent_Identity=29.5, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI20336298, Length=235, Percent_Identity=34.8936170212766, Blast_Score=107, Evalue=3e-23,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=98.9059080962801, Blast_Score=921, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=43.2664756446991, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=39.2953929539295, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=36.7521367521368, Blast_Score=199, Evalue=4e-52,
Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=38.2089552238806, Blast_Score=188, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=34.7945205479452, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=35.243553008596, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71987143, Length=334, Percent_Identity=35.0299401197605, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=37.8082191780822, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71982858, Length=361, Percent_Identity=31.0249307479224, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510309, Length=357, Percent_Identity=38.0952380952381, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510307, Length=357, Percent_Identity=38.0952380952381, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=357, Percent_Identity=38.0952380952381, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=30.5714285714286, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI115533224, Length=361, Percent_Identity=35.1800554016621, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=36.01108033241, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=396, Percent_Identity=35.6060606060606, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI86570094, Length=346, Percent_Identity=36.9942196531792, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=36.5079365079365, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17510559, Length=366, Percent_Identity=34.4262295081967, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=34.2175066312997, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=33.8501291989664, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=353, Percent_Identity=34.5609065155807, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=336, Percent_Identity=35.1190476190476, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI115532548, Length=353, Percent_Identity=34.5609065155807, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=336, Percent_Identity=35.1190476190476, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=408, Percent_Identity=31.6176470588235, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17552642, Length=337, Percent_Identity=34.4213649851632, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17537549, Length=379, Percent_Identity=31.9261213720317, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536101, Length=412, Percent_Identity=31.3106796116505, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17536099, Length=412, Percent_Identity=31.3106796116505, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=339, Percent_Identity=35.3982300884956, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17536103, Length=403, Percent_Identity=31.5136476426799, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=32.5648414985591, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17553716, Length=350, Percent_Identity=30, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=329, Percent_Identity=31.0030395136778, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17556951, Length=400, Percent_Identity=28.25, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=31.9371727748691, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=30.3664921465969, Blast_Score=138, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=29.1457286432161, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=33.3333333333333, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.8472906403941, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=30.0531914893617, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=359, Percent_Identity=29.2479108635098, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=397, Percent_Identity=27.7078085642317, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=26.8882175226586, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=340, Percent_Identity=25.8823529411765, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=82, Percent_Identity=43.9024390243902, Blast_Score=89, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=6e-58,
Organism=Saccharomyces cerevisiae, GI6321360, Length=345, Percent_Identity=39.7101449275362, Blast_Score=219, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6324217, Length=374, Percent_Identity=36.8983957219251, Blast_Score=216, Evalue=9e-57,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=33.2446808510638, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=36.6310160427808, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=32.5227963525836, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=34.7480106100796, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=31.7415730337079, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=36.8421052631579, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=365, Percent_Identity=35.6164383561644, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6325138, Length=368, Percent_Identity=34.5108695652174, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=331, Percent_Identity=33.5347432024169, Blast_Score=186, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=331, Percent_Identity=33.5347432024169, Blast_Score=186, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=400, Percent_Identity=30.75, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=379, Percent_Identity=32.9815303430079, Blast_Score=182, Evalue=8e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=31.7548746518106, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=32.6027397260274, Blast_Score=177, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=29.7297297297297, Blast_Score=173, Evalue=7e-44,
Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=30.4568527918782, Blast_Score=172, Evalue=9e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=448, Percent_Identity=29.4642857142857, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=356, Percent_Identity=28.9325842696629, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6321267, Length=349, Percent_Identity=30.6590257879656, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6323306, Length=401, Percent_Identity=25.9351620947631, Blast_Score=124, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=25.5681818181818, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6321374, Length=413, Percent_Identity=23.9709443099274, Blast_Score=93, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6322876, Length=159, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=38.7640449438202, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=33.972602739726, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.2941176470588, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=37.465564738292, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI21356161, Length=389, Percent_Identity=34.1902313624679, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI28574962, Length=394, Percent_Identity=34.7715736040609, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI28575014, Length=340, Percent_Identity=36.4705882352941, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24585582, Length=345, Percent_Identity=36.231884057971, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24581954, Length=387, Percent_Identity=31.0077519379845, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24581952, Length=387, Percent_Identity=31.0077519379845, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24581956, Length=387, Percent_Identity=31.0077519379845, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=32.8358208955224, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=32.8358208955224, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=37.6021798365123, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24644483, Length=382, Percent_Identity=34.2931937172775, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24644487, Length=382, Percent_Identity=34.2931937172775, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI45551833, Length=382, Percent_Identity=34.2931937172775, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24644485, Length=382, Percent_Identity=34.2931937172775, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI281361218, Length=382, Percent_Identity=34.2931937172775, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24644481, Length=382, Percent_Identity=34.2931937172775, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI18857967, Length=422, Percent_Identity=32.7014218009479, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24644479, Length=386, Percent_Identity=34.4559585492228, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=35.149863760218, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=33.6, Blast_Score=194, Evalue=9e-50,
Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=33.6, Blast_Score=194, Evalue=9e-50,
Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=33.6, Blast_Score=194, Evalue=9e-50,
Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=33.6, Blast_Score=194, Evalue=9e-50,
Organism=Drosophila melanogaster, GI17977678, Length=349, Percent_Identity=34.9570200573066, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=33.0578512396694, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=32.3607427055703, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=33.7988826815642, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=33.7988826815642, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI281365720, Length=308, Percent_Identity=35.7142857142857, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=34.3163538873995, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI17647335, Length=349, Percent_Identity=29.2263610315186, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI24643725, Length=388, Percent_Identity=29.1237113402062, Blast_Score=154, Evalue=9e-38,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=30.1587301587302, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.9093655589124, Blast_Score=131, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=30.5405405405405, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI19920478, Length=355, Percent_Identity=29.8591549295775, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI20130173, Length=332, Percent_Identity=28.0120481927711, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=32.4675324675325, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=32.4675324675325, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24640164, Length=372, Percent_Identity=22.8494623655914, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49225; Mature: 49093

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLAHLQKGTISLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
CCCEEEEECCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
EEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCEEEEEEECH
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
HHCCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCEEEEEECCCHHHHHHHHHHHH
QIKLNWQTPPANSSILPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGVDIGKIAV
EEEEEECCCCCCCCEEEEHHCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECEEEE
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLAHLQKGTISLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
CCCEEEEECCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
EEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCEEEEEEECH
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
HHCCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCEEEEEECCCHHHHHHHHHHHH
QIKLNWQTPPANSSILPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGVDIGKIAV
EEEEEECCCCCCCCEEEEHHCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECEEEE
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]