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The map label for this gene is yuaQ [H]

Identifier: 218694684

GI number: 218694684

Start: 1315755

End: 1318064

Strand: Direct

Name: yuaQ [H]

Synonym: EC55989_1263

Alternate gene names: 218694684

Gene position: 1315755-1318064 (Clockwise)

Preceding gene: 218694683

Following gene: 218694687

Centisome position: 25.52

GC content: 47.32

Gene sequence:

>2310_bases
TTGGAGTCATTACCAACGGGGGATTACTCAATTGGTTTGCTAAGTCAAACGAGTGGAAACCTGAATACTGACACCATAAT
AAGAGTCAACTCTGACGGTTCGGTTACCCCCTCTTTTTCTGACGGAGATGATACATTTATTGTTACTGCGGGTAATCACG
CAGTCGGCGTTCTTGCGTGTGCATCTCCCGGAAGCGCGCGTGCGTGTGTATCTTCTCTTGATGAAGAAAGTACTACCGAT
ACAGGAAGTAATGAAAATAATGCCATAGCAAAACTGGATATGGCAAAAGGGGAGATCACAACCCACGGAACAGAAAGTTA
TGCCGCGTACGCTAATGGCACTGTCGTCAAGGCTGGTGACACGCTTGATTATACCAATGCCAGCGTTACATTAACCGATG
TTGATATCACCACGCATGGGGACAATGCTCATGCCATCGCTGCCCGCCAGGGGACAGTTTCATTTAACCAGGGAGAAATT
TATACAACGGGTCCTGACGCCGCGATTGCTAAAATTTATAATGGCGGCACGGTGACGCTGAAAAATACATCTGCAGTCGC
GCATCAGGGGTCTGGAATTGTGCTGGAGTCTTCCATAAATGGTCAGGAAGCAACGGTAGATATTTTATCTGGTAGCTCAC
TACGGTCAGCAAATGAAATCCTCTACCATAAAAATGAGACGAGTAACGTGACCATTACGGATAGTGAGGTATCATCGGCT
GCAGATGTTTTTATCAATAATATTAAAGGTCATTTGACCGTCGATGCAACTAATTCAAAAATAACGGGTTCAGCTAATAT
TTCAACAGATGATAACACTCATACCTATCTGTCGCTTTCAGATAATAGTACCTGGGATATTAAAGCTGACTCAACGGTGA
GCAACCTCACGGTTGATAATAGTACGGTCTATATTTCCCGGGCAGATGGACGGGATGTCGAACCAACAAGATTAACAATA
ACTGAAAATTACGTTGGTAATAATGGCGTATTGCATCTCAGAACTGAATTGGGTGATGATAATTCAGCTACGGATAAAGT
CGTTATTAATGGAAATACCTCTGGAACAACCCGAGTTAAAGTTACCAATGCAGGAGGCAGCGGAGCTTACACGTTAAATG
GGATAGAGATTATCAGCGTTGAGGGGGAATCAAATGGGGAATTTATTAAGGATTCGAGGATTTTCGCCGGTGCCTACGAA
TATTCATTAACCCGAGGTAATACCGAAGCGACCAATAAAAACTGGTATCTGACTAACTTCCTGGCAACGAGCGGCGGTGA
AACAAACTCCGGAGGAAGTTCAGCGCCTACTGTTGCGCCTACCCCCGTCCTGCGCCTCGAAGCTGGAAGTTACGTCGCCA
ACCTGGCAGCCGCTAACACTCTTTTTGTTATGCGTCTGAACGACCGTGCGGGTGAAATGCGCTACATCGATCCTGTAACT
GAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAG
AACGACCTCGCATCGCTACGTCTCGCAGTTAGGGGCCGAGCTGTTAACCGGTGGTTTTACCGACAGTGACAGTTGGCGTT
TGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTCAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTC
AGAGGCTATTGCGCAGGGCTGTATGCCATTTGGTTTGCCGATGACATCAGTAAAAAAGGCGCATACATTGACGCCTGGGC
GCAATATAGCTGGTTTAAAAACTCGGTGAAAGGGGATGAATTAGCCTATGAATCCTATAGTGCGAAAGGCGCAACCGTCT
CGCTGGAAGCGGGTTACGGCTTTGCCCTGAATAAATCCTTTGGTCTGGAAGCGGCGAAATACACGTGGATATTCCAGCCA
CAGGCACAGGCTATCTGGATGGGCGTCGATCATAATGCGCACACCGAAGCCAATGGCTCACGTATTGAGAATGACGCAAA
TAACAACATCCAGACCCGACTTGGTTTCCGCACCTTTATTCGTACTCAGGAGAAAAACAGCGGTCCGCACGGTGACGACT
TTGAACCTTTTGTTGAAATGAACTGGATCCATAACAGTAAAGATTTTGCTGTCTCAATGAACGGTGTGAAAGTCGAACAA
GATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGGAATGT
GGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGA

Upstream 100 bases:

>100_bases
CTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAA
CATAAAACACTATCAATAAG

Downstream 100 bases:

>100_bases
TCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCAT
GGTGTCATCAATTGCCGTGA

Product: putative Outer membrane autotransporter barrel, putative pectin lyase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MESLPTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLACASPGSARACVSSLDEESTTD
TGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEI
YTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKNETSNVTITDSEVSSA
ADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTI
TENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYE
YSLTRGNTEATNKNWYLTNFLATSGGETNSGGSSAPTVAPTPVLRLEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSV
RGYCAGLYAIWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQP
QAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQ
DGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF

Sequences:

>Translated_769_residues
MESLPTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLACASPGSARACVSSLDEESTTD
TGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEI
YTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKNETSNVTITDSEVSSA
ADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTI
TENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYE
YSLTRGNTEATNKNWYLTNFLATSGGETNSGGSSAPTVAPTPVLRLEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSV
RGYCAGLYAIWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQP
QAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQ
DGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF
>Mature_769_residues
MESLPTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLACASPGSARACVSSLDEESTTD
TGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEI
YTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKNETSNVTITDSEVSSA
ADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTI
TENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYE
YSLTRGNTEATNKNWYLTNFLATSGGETNSGGSSAPTVAPTPVLRLEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSV
RGYCAGLYAIWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQP
QAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQ
DGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1788565, Length=588, Percent_Identity=29.5918367346939, Blast_Score=196, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013425
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 82076; Mature: 82076

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLPTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLAC
CCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEE
ASPGSARACVSSLDEESTTDTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGD
CCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEECCCEEEECCC
TLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIYTTGPDAAIAKIYNGGTVTL
CEEECCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCEEEECCCCCEEEEEECCCEEEE
KNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKNETSNVTITDSEVSSA
ECCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECHHHCHH
ADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDN
HHHEEECCCEEEEEEECCCEEEECEECCCCCCCEEEEEECCCCEEEEEECCCEEEEEECC
STVYISRADGRDVEPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVK
CEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEE
VTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWYLTNF
EEECCCCCEEEECCEEEEEEECCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCEEEEEE
LATSGGETNSGGSSAPTVAPTPVLRLEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEHHCCCCEEEEEEECCCCCCEEEECCCC
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGY
HHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
ARDYNSTHSSVSDYRSKGSVRGYCAGLYAIWFADDISKKGAYIDAWAQYSWFKNSVKGDE
CCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEEEHHHHHHHCCCCCCC
LAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTEANGS
EEEECCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCC
RIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQ
CCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEEC
DGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF
CCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MESLPTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLAC
CCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEE
ASPGSARACVSSLDEESTTDTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGD
CCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEECCCEEEECCC
TLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIYTTGPDAAIAKIYNGGTVTL
CEEECCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCEEEECCCCCEEEEEECCCEEEE
KNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKNETSNVTITDSEVSSA
ECCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECHHHCHH
ADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDN
HHHEEECCCEEEEEEECCCEEEECEECCCCCCCEEEEEECCCCEEEEEECCCEEEEEECC
STVYISRADGRDVEPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVK
CEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEE
VTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWYLTNF
EEECCCCCEEEECCEEEEEEECCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCEEEEEE
LATSGGETNSGGSSAPTVAPTPVLRLEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEHHCCCCEEEEEEECCCCCCEEEECCCC
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGY
HHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
ARDYNSTHSSVSDYRSKGSVRGYCAGLYAIWFADDISKKGAYIDAWAQYSWFKNSVKGDE
CCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEEEHHHHHHHCCCCCCC
LAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTEANGS
EEEECCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCC
RIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQ
CCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEEC
DGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF
CCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA