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The map label for this gene is efeB

Identifier: 218694554

GI number: 218694554

Start: 1191809

End: 1193080

Strand: Direct

Name: efeB

Synonym: EC55989_1129

Alternate gene names: 218694554

Gene position: 1191809-1193080 (Clockwise)

Preceding gene: 218694553

Following gene: 218694556

Centisome position: 23.12

GC content: 53.38

Gene sequence:

>1272_bases
ATGCAGTATGAAGATAAAAACGGCGTGAATGAACCGTCACGCCGACGTTTACTGAAAGGCATTGGTGCGCTGGCGCTGGC
GGGAAGTTGTCCGGTCGCTCATGCACAAAAAACGCAAAGTGCGCCGGGTACGCTTTCACCGGATGCACGCAATGAGAAAC
AGCCGTTTTATGGTGAGCATCAGGCAGGGATCCTGACGCCACAACAGGCCGCAATGATGCTGGTGGCGTTTGATGTGCTT
GCCAGCGATAAACCCGATCTTGAACGGTTGTTTCGCTTGTTGACTCAGCGTTTTGCTTTTCTGACTCAGGGCGGAGCGGC
ACCAGAAACGCCAAATCCGCGCCTGCCACCACTCGATTCCGGCATTCTTGGCGGCTACATTGCGCCCGATAATCTCACCA
TCACGTTATCGGTGGGTCACTCATTGTTTGATGAGCGCTTTGGCCTTGCGCCACAGATGCCGAAAAAGTTGCAGAAGATG
ACGCGTTTTCCCAACGACTCGCTGGATGCGGCGTTATGTCATGGTGATGTGTTGCTACAAATTTGCGCCAACACCCAGGA
CACGGTGATCCATGCGCTGCGCGATATCATCAAACATACGCCAGATTTGCTCAGCGTGCGCTGGAAGCGGGAAGGGTTTA
TTTCCGATCACGCGGCGCGTAGTAAAGGCAAAGAGACGCCGATTAATTTGCTGGGTTTCAAAGACGGCACTGCCAATCCC
GATAGCCAGAATGATAAGTTGATGCAAAAAGTGGTGTGGGTAACGGCAGATCAGCAGGAGCCAGCGTGGACAATCGGTGG
CAGCTATCAGGCAGTACGCTTGATTCAGTTTCGAGTGGAATTTTGGGACAGAACTCCGCTGAAAGAACAGCAGACGATTT
TTGGTCGTGATAAGCAAACCGGTGCGCCGCTGGGAATGCAGCATGAGCATGATGTTCCCGATTACGCCAGCGATCCGGAA
GGGAAGGTGATTGCGCTGGACAGCCATATCCGGCTGGCGAATCCCCGCACGGCGGAGAGTGAGTCCAGCCTGATGCTGCG
TCGTGGCTACAGTTATTCACTGGGCGTCACCAACTCCGGGCAACTGGATATGGGGCTACTGTTTGTCTGTTACCAACACG
ATCTGGAAAAAGGCTTCCTGACTGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGC
GGTTATTTTTTTGCGCTGCCGGGAGTGAAGGACGCGAACGATTATCTCGGAAGCGCGTTATTGCGGGTTTAA

Upstream 100 bases:

>100_bases
AATTGACCGATGCCGACCGGAATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTG
CTGGGATTGGATTAAGCATT

Downstream 100 bases:

>100_bases
TGTTTATAGACGGATAAGGCGTTCTTGCGCAGATGCCTGATGCGATGCTTGCGCGTCTTCTTATGCCTACAATCGGTGCG
GGTTCGGTAGGCGGATAAGG

Product: iron transport heme-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVL
ASDKPDLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPE
GKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGG
GYFFALPGVKDANDYLGSALLRV

Sequences:

>Translated_423_residues
MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVL
ASDKPDLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPE
GKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGG
GYFFALPGVKDANDYLGSALLRV
>Mature_423_residues
MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVL
ASDKPDLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPE
GKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGG
GYFFALPGVKDANDYLGSALLRV

Specific function: May have a role as a peroxidase [H]

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787255, Length=423, Percent_Identity=98.8179669030733, Blast_Score=865, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314
- InterPro:   IPR006313
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 46705; Mature: 46705

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEH
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
QAGILTPQQAAMMLVAFDVLASDKPDLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDS
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQ
CCCCCEECCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
HHCCCHHHHHHHHHHHHHCCCHHEEEEEHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCC
DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT
CCCHHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSG
CCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHCCCCEEECCCCCC
QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYLGSAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
LRV
HCC
>Mature Secondary Structure
MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEH
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
QAGILTPQQAAMMLVAFDVLASDKPDLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDS
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQ
CCCCCEECCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
HHCCCHHHHHHHHHHHHHCCCHHEEEEEHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCC
DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT
CCCHHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSG
CCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHCCCCEEECCCCCC
QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYLGSAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
LRV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]