Click here to switch to the map view.

The map label for this gene is rz

Identifier: 218694483

GI number: 218694483

Start: 1117809

End: 1118360

Strand: Direct

Name: rz

Synonym: EC55989_1058

Alternate gene names: 218694483

Gene position: 1117809-1118360 (Clockwise)

Preceding gene: 218694482

Following gene: 218694484

Centisome position: 21.68

GC content: 53.99

Gene sequence:

>552_bases
GTGCTGAACTTATTCGGGCAATGGCATTTGCCATTCGTATTGTGGCCATTGCTGTTCTGGTCTGGGCAATCCGTTGGTGG
TGATATGAACCGTGTTCTGTGTGTGGTGATTATTGTCATGCTGGTGGCCTGTGGTGCGCTTAGTCTGGGGCTGAATCATT
ACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGTCAGAGAACTGAAGCTGGCGAACGCGGCAATTACT
GACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACTCGAGGGAATTAGCCGATGCGAGAGCTGAAAA
TGAAACTCTTCGCGCTGACGTTGCCGCTGGTCGTAAGCGCCTGCGTATCAACGCCACCTGTCCAGGTCCCGTGCGTGAAG
CCACCGGCACCGCCCGCGTGGATAATGCAACCGGCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGA
GAGCGGCTGATGACGATGCACAAGCAACTGGAAGGGGCGCAGGAATATATCCGTACTCAGTGCCTGAAATAA

Upstream 100 bases:

>100_bases
TGCTATTAAGTGGGTGGCTGTTGGTATTGCTGTGTCTCCGATGCTATATGGGCTGGCAAAACTGGTCATTGCGCTGAAAT
CGTGAACTTTAAAAAGATGA

Downstream 100 bases:

>100_bases
GTTTTGTTGATGCGCCGTATCGTCGCTGTATTCCCTCATTAACAGAGACCGCAGCCCGACAGGGAGACTCCTCTGCGCGA
GTGTGCGGGGATAATCAAAA

Product: Endopeptidase (Lysis protein) from bacteriophage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVMLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAIT
DMQMRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLR
ERLMTMHKQLEGAQEYIRTQCLK

Sequences:

>Translated_183_residues
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVMLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAIT
DMQMRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLR
ERLMTMHKQLEGAQEYIRTQCLK
>Mature_183_residues
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVMLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAIT
DMQMRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLR
ERLMTMHKQLEGAQEYIRTQCLK

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=153, Percent_Identity=69.9346405228758, Blast_Score=209, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 20635; Mature: 20635

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVMLVACGALSLGLNHYRDNAIT
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YKAQRDKNVRELKLANAAITDMQMRQRDVAALDAKYSRELADARAENETLRADVAAGRKR
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEE
LRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLRERLMTMHKQLEGAQEYIRTQ
EEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLK
CCC
>Mature Secondary Structure
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVMLVACGALSLGLNHYRDNAIT
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YKAQRDKNVRELKLANAAITDMQMRQRDVAALDAKYSRELADARAENETLRADVAAGRKR
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEE
LRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLRERLMTMHKQLEGAQEYIRTQ
EEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]