| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is ybhG
Identifier: 218694269
GI number: 218694269
Start: 889207
End: 890205
Strand: Reverse
Name: ybhG
Synonym: EC55989_0839
Alternate gene names: 218694269
Gene position: 890205-889207 (Counterclockwise)
Preceding gene: 218694270
Following gene: 218694268
Centisome position: 17.27
GC content: 57.76
Gene sequence:
>999_bases GTGATGAAAAAACCTGTCGTGATCGGATTGGCGGTAGTGGTACTTGCCGCCGTGGTTGCCGGAGGCTACTGGTGGTATCA AAGCCGCCAGGATAACGGCCTGACGCTGTATGGCAACGTGGATATTCGTACGGTAAATCTTAGTTTCCGTGTTGGGGGGC GCGTTGAATCGCTGGCGGTGGACGAAGGTGATGCGATCAAAGCGGGCCAGGTGCTGGGCGAACTGGATCACAAGCCGTAT GAGATTGCCCTGATGCAGGCGAAAGCGGGCGTCTCGGTGGCACAGGCGCAGTATGACCTGATGCTTGCCGGGTATCGCGA TGAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCGCAGAACTTCTATAACCGCC AGCAAGGGTTGTGGAAAAGCCGCACCATTTCGGCAAACGACCTGGAAAATGCCCGCTCCTCGCGCGACCAGGCGCAGGCA ACGCTGAAATCAGCACAGGATAAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCCCAGGCGAAAGCCAG CCTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGTTGAATTTGCAGGACTCAACGTTGATAGCCCCGTCTGATGGCA CGCTGTTAACGCGCGCGGTGGAGCCAGGCACGGTTCTCAATGAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCG GTGTGGGTACGTGCCTATGTTGACGAACGTAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGG TCGCCCGGACAAGCCCTATCACGGGCAGATTGGTTTCGTTTCGCCGACTGCTGAATTTACCCCGAAAACCGTCGAAACAC CGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCG GTGACGGTGCAATTCGGTAACGAGGCAGGACATGAATGA
Upstream 100 bases:
>100_bases GCTGGACCGCGTTCGATGAAGAAAAGACCGAACTGATCAACCAGACGGTGACCTGTCATATCGACCTGATTTTGCAAGGA TTATCGCAAAGGAGTTTGTA
Downstream 100 bases:
>100_bases TGCCGTTATCACGCTGAACGGCCTGGAAAAACGCTTTCCGGGCATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCA TTCACGCCGGTTATGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPY EIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP VTVQFGNEAGHE
Sequences:
>Translated_332_residues MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPY EIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP VTVQFGNEAGHE >Mature_332_residues MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPY EIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP VTVQFGNEAGHE
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=332, Percent_Identity=99.3975903614458, Blast_Score=670, Evalue=0.0, Organism=Escherichia coli, GI1789900, Length=306, Percent_Identity=29.4117647058824, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI87081796, Length=292, Percent_Identity=26.3698630136986, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790519, Length=245, Percent_Identity=26.9387755102041, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1789041, Length=262, Percent_Identity=25.5725190839695, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87081951, Length=269, Percent_Identity=24.5353159851301, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 36416; Mature: 36416
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAV CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECEEEEEEEEEEEECCCEEEEEE DEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQA CCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHH QAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQD HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCEEECCCCEEEEEECCC VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCE VYRLRIVVTDADDALRQGMPVTVQFGNEAGHE EEEEEEEEECCHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAV CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECEEEEEEEEEEEECCCEEEEEE DEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQA CCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHH QAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQD HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCEEECCCCEEEEEECCC VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCE VYRLRIVVTDADDALRQGMPVTVQFGNEAGHE EEEEEEEEECCHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA