| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218694238
Identifier: 218694238
GI number: 218694238
Start: 856179
End: 856850
Strand: Direct
Name: 218694238
Synonym: EC55989_0808
Alternate gene names: NA
Gene position: 856179-856850 (Clockwise)
Preceding gene: 218694237
Following gene: 218694239
Centisome position: 16.61
GC content: 59.67
Gene sequence:
>672_bases ATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCGCGCATCTGCCTTTACGGGGATTTGCAACGATTTGG CCGCCGCATCGACCTTCGTGTGAAAACGGGGGCTGAAGCCATCCGCGCACTGGCCACACAGCTCCCGGTGTTTCGTCAGA AACTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGTCCGGGTTAACGGCGCAGTTACATGAG ACTCTGCCTGATGGCGCTGTGATTCATATTGTTCCCAGAGTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCT GGGGGCTGCCGCCATTGCCGGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGGTG GTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCAGATGCTGGCACCGAAAGCCAGA ACTCCCCGTACACAGACAACGGATAACGGCAAACAGAACACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAA TGTTCTGCCGGTTCTGTACGGTGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGGG ACGGTGGTCAGGTTGTGGTGATTGGTCGCTGA
Upstream 100 bases:
>100_bases GTTCATCGGTGCCGAATCATGCCGCCATTTACTGTGGTGATGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAA CGAGAGAGGTATACCGACAA
Downstream 100 bases:
>100_bases TGCAAAATGTTTTATGTGAAACCGCCTCCGGGCGGTTTTATCGTTTATGGAGCATGACGAATGGGTAAAGGCAGCAGTAA GGGGCATACCCCGCGCGAAG
Product: Tail assembly protein I
Products: NA
Alternate protein names: Bacteriophage Lambda Tail Assembly Protein I; Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly I; Bacteriophage Tail Protein; Tail Assembly Protein I; Bacteriophage Protein; Tail Assembly Protein; Tail Assembly Protein I Prophage; Phage-Related Protein Tail Component; Prophage LambdaSo Tail Assembly Protein I; Phage Tail Assembly Protein I; Phage Tail Component; Tail Assembly Protein I-Like; Phage Tail Protein; Gp63 Phage Protein
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPVFRQKLSDGWYQVRIAGRDVSTSGLTAQLHE TLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKAR TPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
Sequences:
>Translated_223_residues MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPVFRQKLSDGWYQVRIAGRDVSTSGLTAQLHE TLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKAR TPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR >Mature_222_residues AATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPVFRQKLSDGWYQVRIAGRDVSTSGLTAQLHET LPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKART PRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23140; Mature: 23009
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPVFRQKLSDGWY CCCCCCCCCCCCCCEEEEEHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE QVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGSFFTAG EEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCC ATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH NMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR HHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEC >Mature Secondary Structure AATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPVFRQKLSDGWY CCCCCCCCCCCCCEEEEEHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE QVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGSFFTAG EEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCC ATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH NMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR HHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA