| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218694231
Identifier: 218694231
GI number: 218694231
Start: 850330
End: 851100
Strand: Direct
Name: 218694231
Synonym: EC55989_0801
Alternate gene names: NA
Gene position: 850330-851100 (Clockwise)
Preceding gene: 218694230
Following gene: 218694232
Centisome position: 16.5
GC content: 56.81
Gene sequence:
>771_bases ATGTCATTACCTATGAAATGTGAGGACGATATGCCTGTACCAAATCCAATAATGCCGGTGAAAGGGGCCGGGACCACACT GTGGGTTTATAAGGGGAACGGTGACCCTTATGCGAACCCGCTTTCAGACGTTGACTGGTCGCGTCTGGCTAAAGTTAAAG ACCTGACGCCCGGCGAACTGACCGCTGAGTCCTATGACGACAGCTATCTCGATGATGAAGATGCGGACTGGACTGCGACC GGGCAGGGGCAGAAATCTGCCGGAGATACCAGCTTCACGCTGGCGTGGATGCCCGGAGAGCAGGGGCAGCAGGCGCTGCT GGCGTGGTTTAATGAAGGGGATACCCGTGCCTATAAAATCCGCTTCCCGAACGGCACGGTCGATGTGTTCCGCGGCTGGG TCAGCAGTATCGGTAAGGCGGTGACGGCGAAGGAAGTGATCACCCGCACGGTGAAAGTCACCAACGTGGGACGTCCGTCG ATGGCAGAAGATCGCAGCACGGTAACAGCGGCAACCGGCATGACCGTGACGCCTGCCAGCACTTCGGTGGTGAAAGGGCA GAGCACCACGCTGACCGTGGCATTCCAGCCGGAAGGCGCAACCGACAAGAGTTTCCGTGCGGTGTCTGCGGATAAAACAA AAGCCACCGTGTCGGTCAGTGGTATGACCATCACCGTGAAAGGTGTTGCTGCAGGCAAGGTCAACATTCCGGTTGTATCC GGTAATGGTGAACTTGCTGTGGTTGCAGAAATCACCGTCACCGACAGTTAA
Upstream 100 bases:
>100_bases GTCCCGGCACTGTCAGATTTGATCACCAGTATGGTGGCCAGTGGCTATGACTACCGGCGCGACGATGATGCGGGCCTGTG GAGTTCAGCCGATCTGACTT
Downstream 100 bases:
>100_bases TCCGGAGAGTCAGCGATGTTCCTGAAAACCGAATCATTTGAATATAACGGTGTGAGCGTCACGCTTTCTGAACTGTCAGC CCTGCAGCGAATTGAGCATC
Product: Major tail protein V
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail Protein; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSLPMKCEDDMPVPNPIMPVKGAGTTLWVYKGNGDPYANPLSDVDWSRLAKVKDLTPGELTAESYDDSYLDDEDADWTAT GQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPS MAEDRSTVTAATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVS GNGELAVVAEITVTDS
Sequences:
>Translated_256_residues MSLPMKCEDDMPVPNPIMPVKGAGTTLWVYKGNGDPYANPLSDVDWSRLAKVKDLTPGELTAESYDDSYLDDEDADWTAT GQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPS MAEDRSTVTAATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVS GNGELAVVAEITVTDS >Mature_255_residues SLPMKCEDDMPVPNPIMPVKGAGTTLWVYKGNGDPYANPLSDVDWSRLAKVKDLTPGELTAESYDDSYLDDEDADWTATG QGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSM AEDRSTVTAATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVSG NGELAVVAEITVTDS
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27023; Mature: 26892
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPMKCEDDMPVPNPIMPVKGAGTTLWVYKGNGDPYANPLSDVDWSRLAKVKDLTPGEL CCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCE TAESYDDSYLDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKI ECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEE RFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPAS ECCCCCHHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEECCCC TSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVS CEEEECCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEECEEEEEEEC GNGELAVVAEITVTDS CCCCEEEEEEEEEECC >Mature Secondary Structure SLPMKCEDDMPVPNPIMPVKGAGTTLWVYKGNGDPYANPLSDVDWSRLAKVKDLTPGEL CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCE TAESYDDSYLDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKI ECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEE RFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPAS ECCCCCHHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEECCCC TSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVS CEEEECCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEECEEEEEEEC GNGELAVVAEITVTDS CCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA