| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is E
Identifier: 218694226
GI number: 218694226
Start: 847516
End: 848568
Strand: Direct
Name: E
Synonym: EC55989_0796
Alternate gene names: NA
Gene position: 847516-848568 (Clockwise)
Preceding gene: 218694225
Following gene: 218694227
Centisome position: 16.44
GC content: 56.13
Gene sequence:
>1053_bases GTGCGGCTTTTTTTACGGGATTTTTTTATGTCGATGTACACAACCGCCCAGCTGCTGGCGGCAAATGAGCAGAAATTTAA GTTTGATCCGCTGTTTCTGCGTCTCTTTTTCCGTGAGAGCTATCCCTTCACCACGGAGAAAGTCTATCTCTCACAAATTC CTGGACTGGTAAACATGGCGCTGTACGTTTCGCCAATTGTTTCCGGTGAGGTTATCCGTTCCCGTGGCGGCTCCACCTCT GAATTTACGCCGGGTTATGTCAAGCCGAAGCATGAGGTGAATCCGCAGATGACCCTGCGTCGCCTGCCGGATGAAGATCC GCAGAATCTGGCGGACCCGGCTTACCGCCGCCGTCGCATCATCCTGCAGAACATGCGTGACGAAGAGCTGGCCATTGCTC AGGTCGAAGAGATGCAGGCAGTTTCTGCCGTGCTCAAGGGCAAATACACCATGACCGGTGAAGCCTTCGATCCGGTTGAG GTGGATATGGGCCGCAGTGCGGCGAACAACATCACGCAGTCCGGCGGCACGGAGTGGAGCAAGCGTGACAAGTCCACGTA TGACCCGACCGACGATATCGAAGCCTACGCGCTGAACGCCAGCGGCGTGGTGAATATCATCGTGTTTGATCCGAAAGGCT GGGCGCTGTTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGCGGCTCTAATTCCGAGCTGGAGACAGCG GTAAAAGACCTGGGCGAAGCGGTGTCCTATAAGGGGATGTATGGCGATACGGCGATCGTCGTGTATTCCGGACAGTACGT GGAAAACGACGTCAAAAAGAACTTCCTGCCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCT ATGGCTGCATTCAGGATGCGGACGCACAGCGCGAAGGTATTAACGCCTCTGCCCGCTACCCGAAAAACTGGGTGACCACC GGCGATCCGGCGCGTGAGTTCACCATGATTCAGTCAGCACCGCTGATGCTGCTGGCTGACCCTGATGCGTTCGTGTCCGT ACAACTGGCGTAA
Upstream 100 bases:
>100_bases TGGCCGGAGGCTGCCAGCGACGAGACGAAAAAACGGACCGCGTTTGCCGGAACGGCAATCAGCATCGTTTAACCTGACCC TTCATCACTAAAGGCCGCCT
Downstream 100 bases:
>100_bases TCATGGCCCTTCGGGGCCATTTTCTCTCTGTGGAGGAGTCTATGACGAAAGATGAACTGATTGCCCGTCTTCAGGTGCTG GGTGAGCAACTGAACCGTGA
Product: Major head coat protein from bacteriophage origin
Products: NA
Alternate protein names: Head protein gp7 [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRLFLRDFFMSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTS EFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRIILQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVE VDMGRSAANNITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETA VKDLGEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTT GDPAREFTMIQSAPLMLLADPDAFVSVQLA
Sequences:
>Translated_350_residues MRLFLRDFFMSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTS EFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRIILQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVE VDMGRSAANNITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETA VKDLGEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTT GDPAREFTMIQSAPLMLLADPDAFVSVQLA >Mature_350_residues MRLFLRDFFMSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTS EFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRIILQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVE VDMGRSAANNITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETA VKDLGEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTT GDPAREFTMIQSAPLMLLADPDAFVSVQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lambda phage gpE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005564 [H]
Pfam domain/function: PF03864 Phage_cap_E [H]
EC number: NA
Molecular weight: Translated: 39284; Mature: 39284
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFLRDFFMSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH LYVSPIVSGEVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRI HHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCHHHHHHHH ILQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANNITQSGGTEWS HHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHHHHHCCCCCCCH KRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETA HCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH VKDLGEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGNTQARGLRTYGCIQDA HHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCHHCCCCCC DAQREGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDAFVSVQLA CHHHHCCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCEEEEEEC >Mature Secondary Structure MRLFLRDFFMSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH LYVSPIVSGEVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRI HHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCHHHHHHHH ILQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANNITQSGGTEWS HHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHHHHHCCCCCCCH KRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETA HCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH VKDLGEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGNTQARGLRTYGCIQDA HHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCHHCCCCCC DAQREGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDAFVSVQLA CHHHHCCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]