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The map label for this gene is nmpC

Identifier: 218694213

GI number: 218694213

Start: 836617

End: 837699

Strand: Reverse

Name: nmpC

Synonym: EC55989_0782

Alternate gene names: 218694213

Gene position: 837699-836617 (Counterclockwise)

Preceding gene: 218694218

Following gene: 218694199

Centisome position: 16.25

GC content: 44.04

Gene sequence:

>1083_bases
ATGAAAAAATTAACAGTGGCAATTTCTGCTGTAGCTGCATCAGTACTGATGGCGATGTCTGCTCAGGCAGCTGAAATTTA
TAATAAAGACAGTAACAAGCTGGATCTGTACGGGAAAGTTAATGCTAAGCACTACTTCTCCTCTAATGATGCAGATGATG
GTGATACTACTTATGCCCGTCTTGGCTTCAAAGGTGAAACCCAAATCAACGATCAACTGACTGGTTTCGGTCAGTGGGAA
TATGAATTCAAAGGCAACCGCGCTGAATCTCAAGGTTCCTCCAAAGACAAAACCCGTCTTGCATTTGCAGGCCTGAAATT
CGGTGACTACGGCTCAATCGATTACGGCCGTAACTACGGTGTAGCATACGACATCGGTGCGTGGACTGACGTTCTGCCAG
AATTCGGTGGCGATACCTGGACCCAAACAGATGTATTCATGACTGGTCGCACCACAGGTGTTGCAACTTATCGTAACAAC
GACTTCTTTGGTCTGGTTGATGGCCTGAACTTTGCAGCTCAGTATCAGGGCAAAAATGACCGAAATGAAGTAACTGAAGC
TAATGGCGATGGTTTCGGTTTCTCAACTACTTATGAGTATGAAGGATTCGGCGTGGGTGCAACCTATGCTAAATCTGATC
GCACTAATAATCAGGTTATCTACGGTAACAACGGTCTGAATGCTTCTGGTCAAAATGCTGAAGTATGGGCAGCTGGTCTG
AAATATGATGCGAACAACATCTATCTGGCCACCACCTATTCTGAAACCCAGAACATGACTGTTTTTGGTAATAACCATAT
TGCCAACAAAGCACAAAACTTCGAAGCTGTTGCACAATATCAGTTCGACTTCGGCCTGCGTCCATCCGTTGCTTACCTGC
ATTCTAAAGGAAAAGACTTGGGTGTTTGGGGTGATCAGGACCTGGTTGAATATGTTGATGTAGGTGCAACCTATTACTTC
AACAAAAATATGTCCACTTTTGTTGACTACAAAATCAACCTGATTGATAAGAGCGATTTCACGAAAGCATCTGGCGTTGC
TACCGATGATATCGTTGCTGTAGGTATGGTTTACCAGTTCTAA

Upstream 100 bases:

>100_bases
AAACTAAAACTTACATCTTGAAATAATCACATTGATTAGATGAATATTTATCGCGCAGTGACATCATTTTTTAATAATAG
TTCAAAAAAAAGGGCTCACG

Downstream 100 bases:

>100_bases
TTTGATTACTAAAAGATATGTTGTGGGAGGCTTTGCCTCCCCAACATATAAGTGGCTCCCTCAAGCCACTTCCTTTAGAA
GCACAACCTTGCTTCTAACT

Product: outer membrane porin; DLP12 prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWE
YEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVIYGNNGLNASGQNAEVWAAGL
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDLGVWGDQDLVEYVDVGATYYF
NKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF

Sequences:

>Translated_360_residues
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWE
YEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVIYGNNGLNASGQNAEVWAAGL
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDLGVWGDQDLVEYVDVGATYYF
NKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF
>Mature_360_residues
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWE
YEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVIYGNNGLNASGQNAEVWAAGL
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDLGVWGDQDLVEYVDVGATYYF
NKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein. Note=When expressed in mutant CS384 [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

Organism=Escherichia coli, GI1787641, Length=360, Percent_Identity=64.1666666666667, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI1786436, Length=362, Percent_Identity=62.1546961325967, Blast_Score=432, Evalue=1e-122,
Organism=Escherichia coli, GI1788544, Length=369, Percent_Identity=60.9756097560976, Blast_Score=423, Evalue=1e-120,
Organism=Escherichia coli, GI1787160, Length=373, Percent_Identity=58.7131367292225, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001897
- InterPro:   IPR013793
- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39620; Mature: 39620

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00576 GRAM_NEG_PORIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYAR
CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEE
LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG
ECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCC
VAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKND
EEEECCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEECCCCC
RNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVIYGNNGLNASGQNAEVWAAGL
CCHHHCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEE
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDL
EECCCEEEEEEEECCCCCEEEEECCCCCCCHHCCEEEEEEEECCCCCCCCHHHHCCCCCC
GVWGDQDLVEYVDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF
CCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHEEEEEEEECC
>Mature Secondary Structure
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYAR
CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEE
LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG
ECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCC
VAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKND
EEEECCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEECCCCC
RNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVIYGNNGLNASGQNAEVWAAGL
CCHHHCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEE
KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDL
EECCCEEEEEEEECCCCCEEEEECCCCCCCHHCCEEEEEEEECCCCCCCCHHHHCCCCCC
GVWGDQDLVEYVDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF
CCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3017988; 9278503; 8057841; 8648624 [H]