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The map label for this gene is ybeR

Identifier: 218694085

GI number: 218694085

Start: 692161

End: 692868

Strand: Direct

Name: ybeR

Synonym: EC55989_0637

Alternate gene names: 218694085

Gene position: 692161-692868 (Clockwise)

Preceding gene: 218694083

Following gene: 218694086

Centisome position: 13.43

GC content: 45.9

Gene sequence:

>708_bases
ATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCA
TTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCCTGGGGAATTGATGCCCGTGATGACCTGC
TGCGCACAATTCACCGAATGATCGATAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCG
CCATGTGAATGGCGTGACTATCTTGCTGAACTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACCGCCGA
ATGCTGTGGTGAGGGAGGAATTAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACT
GGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATCGTAACTGGCGGCAA
TACTTTGCCGGTTATACCTTTGGTCGGCAATATTGGCAGTCTCCCGAAGATGATCATCTGCAGTTATTACGCGAATTCTT
AGCGCGTAAAGAATACGACGATTCCGGCAATGATATGTTTTATCAATTATTTGCCAGTGATGATGCGTATTACCCTACCT
TGTCCTGGCAACCATTGGCTTACTATTCTGCATGCCCGGAAACGCTTAAGGATATGAGCGACCTATGA

Upstream 100 bases:

>100_bases
GCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATG
AATATTTAAGGATAAATTAT

Downstream 100 bases:

>100_bases
AAAATTGCTGGAAGATTCTCGAAATAGAGGAAACGACTGACGTCGATATTATCCGCCGCGCTTATCTGGCGCTGTTACCG
TCCTTTCATCCAGAAACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRMIDNGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQ
YFAGYTFGRQYWQSPEDDHLQLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL

Sequences:

>Translated_235_residues
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRMIDNGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQ
YFAGYTFGRQYWQSPEDDHLQLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL
>Mature_235_residues
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRMIDNGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQ
YFAGYTFGRQYWQSPEDDHLQLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeU [H]

Homologues:

Organism=Escherichia coli, GI1786865, Length=235, Percent_Identity=98.7234042553192, Blast_Score=484, Evalue=1e-138,
Organism=Escherichia coli, GI1786868, Length=235, Percent_Identity=59.1489361702128, Blast_Score=289, Evalue=1e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009677 [H]

Pfam domain/function: PF06889 DUF1266 [H]

EC number: NA

Molecular weight: Translated: 27792; Mature: 27792

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEHHHEEECCCCCCCCCHHHHHHHHHHH
IDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQYFAGYTFGRQYWQSPEDDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEHHHEEECCCCCCCCCHHHHHHHHHHH
IDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQYFAGYTFGRQYWQSPEDDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]