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The map label for this gene is ybeQ

Identifier: 218694084

GI number: 218694084

Start: 691020

End: 691997

Strand: Reverse

Name: ybeQ

Synonym: EC55989_0636

Alternate gene names: 218694084

Gene position: 691997-691020 (Counterclockwise)

Preceding gene: 218694087

Following gene: 218694082

Centisome position: 13.42

GC content: 46.83

Gene sequence:

>978_bases
ATGATTTTCACGTCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGCGATTGCGAGGC
TCAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAATTGATTCTCCGGACGACGAAAAAGCCTTTTACTGGCTGA
AGCTGGCCGCTGAGCAAGGTCATTGTGAAGCACAGTATTCCTTAGGGCAAAAGTATACCGAGGATAAAAGCCGTCATAAA
GATAATGAGCAAGCCATCTTCTGGCTGAAAAAAGCTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGGCTGGAC
ACTGGATCGTGGAGAAGCCCCCAATTATAAAGAAGCGGTTGTCTGGTATCAGATAGCCGCGGAGAGCGGAATGTCTTATG
CGCAAAATAATCTTGGGTGGATGTACAGAAATGGCAACGGAGTCGCAAAAGACTATGCGCTGGCATTTTTCTGGTACAAA
CAAGCTGCATTACAAGGCCATAGTGACGCGCAAAACAATCTGGCCGATCTTTATGAAGACGGAAAAGGCGTTGCTCAAAA
CAAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCATGCTCAGTTTCAAATTGCATGGGATT
ATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCGATGTACTGGTATCTGAAGGCTGCCGCTCAGGGGAGCGTC
GGCGCTTACGTCAACATCGGTTATATGTATAAACACGGACAAGGCGTTGAGAAAGATTATCAGGCTGCCTTTGAATGGTT
TACGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAAGACCTG
TCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGTCATCCGGAACCAGAGATGTCAGTCAGGAAATTCGTGAG
ACTGAAGATTTACTGTAG

Upstream 100 bases:

>100_bases
ACTTTTCTGACGCGACATAATACGCATAAAATAAGGCTTACGCAAAAATGGAACACATAAAAATATAATATGTTTTATCT
GCAACCATAAGGAAATGATA

Downstream 100 bases:

>100_bases
AGATAAAAACAAGGGCCGGGGAATTTCATTCGGCCCATATTCTCTTTATTGCTGTGCGAAATCAGACTATTACGGCTCAA
ACGGGCGTCTCTGGAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHK
DNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRE
TEDLL

Sequences:

>Translated_325_residues
MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHK
DNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRE
TEDLL
>Mature_325_residues
MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHK
DNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRE
TEDLL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT

Homologues:

Organism=Homo sapiens, GI19923669, Length=324, Percent_Identity=30.2469135802469, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI151301150, Length=324, Percent_Identity=29.9382716049383, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI217330658, Length=212, Percent_Identity=27.8301886792453, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI217330656, Length=212, Percent_Identity=27.8301886792453, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=100, Blast_Score=669, Evalue=0.0,
Organism=Escherichia coli, GI1786867, Length=127, Percent_Identity=35.4330708661417, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=317, Percent_Identity=25.8675078864353, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6319410, Length=275, Percent_Identity=29.4545454545455, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355295, Length=311, Percent_Identity=29.5819935691318, Blast_Score=105, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBEQ_ECOLI (P77234)

Other databases:

- EMBL:   U82598
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B64799
- RefSeq:   AP_001293.1
- RefSeq:   NP_415177.4
- ProteinModelPortal:   P77234
- SMR:   P77234
- STRING:   P77234
- EnsemblBacteria:   EBESCT00000001469
- EnsemblBacteria:   EBESCT00000016131
- GeneID:   945251
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5091
- KEGG:   eco:b0644
- EchoBASE:   EB3411
- EcoGene:   EG13647
- eggNOG:   COG0790
- GeneTree:   EBGT00050000008859
- HOGENOM:   HBG706903
- OMA:   LKENSGC
- ProtClustDB:   CLSK905303
- BioCyc:   EcoCyc:G6351-MONOMER
- Genevestigator:   P77234
- GO:   GO:0005488
- InterPro:   IPR006597
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10
- SMART:   SM00671

Pfam domain/function: PF08238 Sel1

EC number: NA

Molecular weight: Translated: 37031; Mature: 37031

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAV
CCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHEE
VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYED
EEEEEHHHCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
GKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
CCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQSSGTRDVSQEIRETEDLL
HHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAV
CCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHEE
VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYED
EEEEEHHHCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
GKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
CCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQSSGTRDVSQEIRETEDLL
HHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503