Click here to switch to the map view.

The map label for this gene is ecpA

Identifier: 218693755

GI number: 218693755

Start: 324476

End: 325063

Strand: Reverse

Name: ecpA

Synonym: EC55989_0297

Alternate gene names: 218693755

Gene position: 325063-324476 (Counterclockwise)

Preceding gene: 218693756

Following gene: 218693754

Centisome position: 6.31

GC content: 52.89

Gene sequence:

>588_bases
ATGAAAAAAAAGGTTCTGGCAATAGCTCTGGTAACGGTGTTTACCGGCATGGGTGTGGCGCAGGCTGCTGACGTAACAGC
TCAGGCTGTAGCGACCTGGTCGGCAACAGCCAAAAAAGACACCACCAGTAAGCTGGTTGTGACGCCACTCGGTAGCCTGG
CGTTCCAGTATGCCGAAGGCATTAAAGGTTTTAACTCACAGAAAGGTCTATTTGACGTGGCTATCGAGGGTGACTCAACG
GCTACCGCCTTTAAACTGACCTCACGTCTTATCACCAACACATTAACCCAGTTGGATACCTCAGGTTCCACACTGAATGT
GGGCGTGGATTATAACGGCGCGGCAGTCGAAAAAACTGGCGATACCGTGATGATCGATACCGCCAACGGCGTACTGGGCG
GCAACCTTAGCCCGCTGGCTAACGGTTACAATGCCAGCAATCGTACCACCGCACAGGATGGTTTCACCTTCTCCATCATC
AGCGGTACCACCAATGGTACCACCGCAGTAACAGATTACAGCACTCTACCGGAAGGCATCTGGAGCGGCGACGTTAGCGT
ACAGTTCGACGCGACCTGGACCAGTTAA

Upstream 100 bases:

>100_bases
CAAAAATATATAAGTTGGTTCAGTAAACTCCAGGCAAGTTAGTTTTAAAAAATGACTCACTGGGACATCACGTCCTCAAT
TCAACTCGGGAAGAAATGCA

Downstream 100 bases:

>100_bases
TCTCTCTGATGTACCAGCAGGGGTAGCCCCCCTGCTTTATTCCTGGACGGAATTGTTATGAAAAAGCACCTTCTGCCTCT
CGCTCTGCTGTTTTCCGGAA

Product: common pilus ECP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDST
ATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSII
SGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS

Sequences:

>Translated_195_residues
MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDST
ATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSII
SGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS
>Mature_195_residues
MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDST
ATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSII
SGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the matB fimbrillin family [H]

Homologues:

Organism=Escherichia coli, GI1786486, Length=195, Percent_Identity=100, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016514 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20112; Mature: 20112

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCEEEEECHHHHHHHHHHH
IKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTG
HCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC
DTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGI
CEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCC
WSGDVSVQFDATWTS
CCCCEEEEEEEEECC
>Mature Secondary Structure
MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCEEEEECHHHHHHHHHHH
IKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTG
HCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC
DTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGI
CEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCC
WSGDVSVQFDATWTS
CCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA