Click here to switch to the map view.

The map label for this gene is htrE

Identifier: 218693605

GI number: 218693605

Start: 152920

End: 155520

Strand: Reverse

Name: htrE

Synonym: EC55989_0133

Alternate gene names: 218693605

Gene position: 155520-152920 (Counterclockwise)

Preceding gene: 218693606

Following gene: 218693604

Centisome position: 3.02

GC content: 42.98

Gene sequence:

>2601_bases
GTGACTATAAAACCAACTAAAAATTATCATAATCATCTGACCCGTATCGCTACGTTTTGCGCGCTGCTGTATTGCAATAG
TGCTTTCTGTGCTGAACTTGTTGAATATGACCATACCTTCCTGATGGGGCAGAATGCCTCAAATATTGATCTCAGCCGGT
ATAGTGAAGGTAACCCTGCTATACCGGGTATGTACGACGTCAGTGTTTATGTCAACGATCAACCTATTATTAACCAAAGC
ATTACATTTATTGAAATTGAAGGAAAAAAAAACGCACAAGCCTGTATCACACTTAAGAATTTATTGCAGTTTCATATAAA
TTCTCCCGATATAAATAACGAAAAAGCCGTTCTGCTTGCCAGGGATGAAACACTCGGCAATTGCCTTAATTTGACGGAAA
TTATCCCTCAGGCTTCTGTTCGTTATGACGTTAACGAGCAACGTCTGGATATAGACGTTCCTCAGGCATGGGTAATGAAA
AATTACCAAAACTATGTTGATCCATCGTTATGGGAAAATGGCATTAATGCGGCCATGTTGTCATACAACCTCAACGGATA
TCATAGTGAAACTCCTGGTCGAAGAAATGACAGCATTTATGCTGCTTTTAACGGTGGGATGAATTTAGGTGCATGGCGAC
TGCGTGCCTCAGGCAACTACAACTGGATGACCGATTCTGGCAGTAATTATGATTTTAAGAATCGGTATATACAGCGTGAT
ATCGCCTCGCTGCGTTCTCAACTCATTCTTGGTGAGTCTTATACAACGGGCGAAACCTTTGATTCTGTCAGTATCCGCGG
CATTCGTTTATACAGCGACAGCCGCATGTTGCCTCCGACATTAGCGAGTTTTGCGCCTATCATTCATGGCGTTGCTAATA
CCAACGCCAAAGTCACTATTATGCAAGGTGGCTATAAGATTTATGAAACGACTGTGCCGCCAGGCGCGTTCGTCATTGAT
GATCTGAGTCCGTCAGGTTACGGCAGCGATCTTATTGTTACTGTCGAAGAATCCGATGGCTCAAAGCGGACATTCTCGCA
ACCTTTTTCATCGGTCGTTCAAATGTTACGCCCTGGCGTTGGACGTTGGGATATTAGCGGCGGCCAGGTCTTAAAAGATG
ATATTCAGGATGAGCCTAATTTATTTCAGGCCAGCTACTACTACGGTCTGAATAACTATCTAACGGGTTATACTGGTATT
CAGATTACCGATAATAACTATACCGCTGGTTTGTTAGGTCTTGGTCTGAATACTTCAGCCGGTGCATTTTCTTTCGATGT
GACTCACTCCAATGTTCGTATACCGGATGATAAAACATATCAGGGACAAAGTTATCGTGTTTCCTGGAACAAGTTATTCG
AAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATACACTAACT
CTAATTGATGAAGTGAAACATCCCGAACAAGATCTTGAACCGAAATCCATGCGTAATTACTCGCGCATGAAAAATCAGGT
TACGGTCAGTATTAACCAACCGCTAAAATTTGAGAAAAAAGATTACGGTTCATTTTATCTTTCCGGAAGTTGGTCCGATT
ACTGGGCTTCCGGACAAAATCGTAGCAATTACTCTATTGGCTACAGTAACAGTGCATCCTGGGGCAGCTACAGTGTCAGT
GCCCAGCGTTCATGGAATGAAGACGGCGACACTGACGATAGCGTTTATCTCAGTTTCACCATTCCTATTGAAAAATTACT
TGGCACTGAACAACGGACTTCAGGTTTCCAGAGTATTGATACTCAAATGAGCAGTGACTTTAAGGGTAATAACCAACTCA
ACGTCAGTAGCAGTGGCTATAGTGATAACGCTCGCGTCAGTTATAGCGTAAATACTGGCTATACGATGAATAAAGCCAGC
AAAGATTTGAGTTATGTTGGGGGTTATGCCAGCTATGAATCACCGTGGGGAACCCTGGCAGGTTCAGTTTCTGCAAATAG
CGATAACAGTCGTCAAGTGTCTCTCAGCACCGACGGTGGTTTTGTATTGCATAGCGGCGGCCTGACCTTCAGTAATGACA
GTTTTAGCGACTCCGATACACTGGCGGTAGTTCAGGCTCCAGGTGCTCAAGGAGCGCGAATAAATTATGGCAACAGTACT
ATCGATCGATGGGGTTATGGTGTCACCAGCGCTCTTTCTCCTTATCATGAAAACCGTATCGCGCTGGATATCAACGATCT
TGAGAACGATGTTGAATTAAAAAGTACCAGTGCAGTAGCTGTACCGCGTCAGGGTTCAGTCGTCTTTGCTGATTTTGAAA
CCGTGCAAGGGCAATCAGCCATTATGAACATCACACGAAGTGATGGTAAAAATATTCCATTTGCTGCAGATATTTATGAT
GAGAAAGGCAATGTCATTGGTAATGTTGGACAGGGTGGACAAGCATTTGTTCGTGGTATTGAGCAGCAGGGAAATATCAG
CATTAAATGGCTCGAAGAAAGTAAACCCGTAAGTTGTCTTGCGCATTATCAACAAAGTTCAGAAGCAGAAAAAATAGCGC
AATCTATTATTCTGAATGGAATTCGGTGTCAGATTCAGTAA

Upstream 100 bases:

>100_bases
GCAAAAGTACATTTTTACGCCATTAATGATTTTGGTGGCGCCATTGAAGGTAATGCCAGTCTGTAATCAGGCAAGGATAT
AATTCCGCAGGAAGCATAAC

Downstream 100 bases:

>100_bases
CTACAAGGGACGTCAAATGATAAAAATAACGCCACATAAAATAGCGATACTGATGGGAATATTATTATCACCATCAGTAT
TTGCAACGGATATTAATGTA

Product: putative outer membrane usher protein

Products: NA

Alternate protein names: Heat shock protein E [H]

Number of amino acids: Translated: 866; Mature: 865

Protein sequence:

>866_residues
MTIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGMYDVSVYVNDQPIINQS
ITFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMK
NYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRD
IASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTIMQGGYKIYETTVPPGAFVID
DLSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGI
QITDNNYTAGLLGLGLNTSAGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDTLT
LIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSASWGSYSVS
AQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQMSSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKAS
KDLSYVGGYASYESPWGTLAGSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNST
IDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIYD
EKGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCLAHYQQSSEAEKIAQSIILNGIRCQIQ

Sequences:

>Translated_866_residues
MTIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGMYDVSVYVNDQPIINQS
ITFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMK
NYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRD
IASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTIMQGGYKIYETTVPPGAFVID
DLSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGI
QITDNNYTAGLLGLGLNTSAGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDTLT
LIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSASWGSYSVS
AQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQMSSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKAS
KDLSYVGGYASYESPWGTLAGSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNST
IDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIYD
EKGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCLAHYQQSSEAEKIAQSIILNGIRCQIQ
>Mature_865_residues
TIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGMYDVSVYVNDQPIINQSI
TFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMKN
YQNYVDPSLWENGINAAMLSYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRDI
ASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTIMQGGYKIYETTVPPGAFVIDD
LSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQ
ITDNNYTAGLLGLGLNTSAGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDTLTL
IDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSASWGSYSVSA
QRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQMSSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKASK
DLSYVGGYASYESPWGTLAGSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTI
DRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIYDE
KGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCLAHYQQSSEAEKIAQSIILNGIRCQIQ

Specific function: Probable porin-like protein necessary for the assembly of a pilin-type protein [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=866, Percent_Identity=97.459584295612, Blast_Score=1743, Evalue=0.0,
Organism=Escherichia coli, GI1790772, Length=885, Percent_Identity=32.316384180791, Blast_Score=412, Evalue=1e-116,
Organism=Escherichia coli, GI1788427, Length=842, Percent_Identity=32.541567695962, Blast_Score=407, Evalue=1e-114,
Organism=Escherichia coli, GI1786744, Length=874, Percent_Identity=31.4645308924485, Blast_Score=387, Evalue=1e-108,
Organism=Escherichia coli, GI1787172, Length=861, Percent_Identity=32.2880371660859, Blast_Score=384, Evalue=1e-107,
Organism=Escherichia coli, GI1789533, Length=794, Percent_Identity=32.6196473551637, Blast_Score=371, Evalue=1e-103,
Organism=Escherichia coli, GI87081778, Length=848, Percent_Identity=27.4764150943396, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI1789610, Length=816, Percent_Identity=24.3872549019608, Blast_Score=137, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 95679; Mature: 95547

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPA
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCC
IPGMYDVSVYVNDQPIINQSITFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLA
CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCEEEEE
RDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAML
CCCCCCHHHHHHHHCCCCCEEECCCCCEEEECCCHHHHHHHHHHHCCHHHHHCCCCEEEE
SYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRD
EEECCCEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHH
IASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTI
HHHHHHHEEECCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE
MQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGV
EECCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
GRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSA
CEEECCCCCEEHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCC
GAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDTLT
CEEEEEEECCEEECCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEEECCCCEECCCHHHH
LIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQN
HHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCC
RSNYSIGYSNSASWGSYSVSAQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSID
CCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEHHHHCCCCHHHCCHHHHH
TQMSSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLA
HHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCEEECCCCCCHHHHCCCCCCCCCCCCEE
GSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNST
EEEECCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEECCCCC
IDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSA
HHHCCCCHHHHCCCCCCCEEEEEECCCCCCEEEECCCEEEECCCCCEEEEEHHHCCCCCE
IMNITRSDGKNIPFAADIYDEKGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCL
EEEEECCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHH
AHYQQSSEAEKIAQSIILNGIRCQIQ
HHHHHCHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
TIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPA
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCC
IPGMYDVSVYVNDQPIINQSITFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLA
CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCEEEEE
RDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAML
CCCCCCHHHHHHHHCCCCCEEECCCCCEEEECCCHHHHHHHHHHHCCHHHHHCCCCEEEE
SYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRD
EEECCCEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHH
IASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTI
HHHHHHHEEECCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE
MQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGV
EECCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
GRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSA
CEEECCCCCEEHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCC
GAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDTLT
CEEEEEEECCEEECCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEEECCCCEECCCHHHH
LIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQN
HHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCC
RSNYSIGYSNSASWGSYSVSAQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSID
CCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEHHHHCCCCHHHCCHHHHH
TQMSSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLA
HHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCEEECCCCCCHHHHCCCCCCCCCCCCEE
GSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNST
EEEECCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEECCCCC
IDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSA
HHHCCCCHHHHCCCCCCCEEEEEECCCCCCEEEECCCEEEECCCCCEEEEEHHHCCCCCE
IMNITRSDGKNIPFAADIYDEKGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCL
EEEEECCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHH
AHYQQSSEAEKIAQSIILNGIRCQIQ
HHHHHCHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8102362; 8202364; 9278503 [H]