| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is creD [H]
Identifier: 218692790
GI number: 218692790
Start: 5205773
End: 5207125
Strand: Direct
Name: creD [H]
Synonym: ECED1_5273
Alternate gene names: 218692790
Gene position: 5205773-5207125 (Clockwise)
Preceding gene: 218692789
Following gene: 218692792
Centisome position: 99.93
GC content: 49.74
Gene sequence:
>1353_bases ATGTTGAAATCCCCCCTGTTCTGGAAAATGACCACCTTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGAT TCGGCAGGTGATTGTCGAACGTGCCGATTACCGTAGCGATGTGGAAGATGTGATTCGCCAAAGTACCAGCGGGCCGCAAA AACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGACGATAAAACCGTGGAGCGGAAA AGAAGTTTTATTCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGCAATCAGAACGTGGAAGAACGCAAGATAGGCAT CTATACCGGTCAGGTCTGGCACAGTGATTTAACGTTAAAAGCCGATTTCGATGTTTCGCGTCTTAGCGAACTCGACGCGC CAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAA GTTAACGGTACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGA AGGGGACTGGCGCAAGCAGAACCTGAAGCTGAATGTGGCGCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTG GCGGGCGTTATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGG GAAGTTAGCGAGTCAGGTTTTCAGGCGCAATGGCAAAGTAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGG CAATGATACCGGCTGGGAAAACTTCCCCGCGTTTAGCGTCGCAGTGACGACGCCAGCCGATCAATACCAATTAACGGACC GGGCGACTAAGTACGCCATTCTGCTGATTGCGCTGACTTTTATGGCATTCTTTGTTTTTGAAACGCTCACCGCGCAACGT TTACACCCAATGCAATATTTGCTGGTGGGGCTGTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATAC CGGTTTTACTGTGGCATGGATAATCGCCAGTCTGATTGGGGCGTTAATGAACGGTATTTATTTGCAGGCGGTATTGAAAG GCTGGCGTAATAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGATGTGGGGACTGCTCAACTCTGCCGAT AGCGCGCTGTTGTTGGGAACCTGTGTGCTGGTGGTGGCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTA TGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACCATGGACGATGAATTACGTATCTGGAAATAA
Upstream 100 bases:
>100_bases TGGCATGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGCCTTCGTATCCTGCTG TCATTGCAAAGGAGAAGACT
Downstream 100 bases:
>100_bases GGTAGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTATTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCA GAAGCGATAACCTTCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDVIRQSTSGPQKLVGPLIAIPVTELYTVQEDDKTVERK RSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLKADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPE VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLKLNVALNLSGTGDLSVVPGGRYSEMTLTSNWPHPSFLGDFLPAKR EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQR LHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSAD SALLLGTCVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDELRIWK
Sequences:
>Translated_450_residues MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDVIRQSTSGPQKLVGPLIAIPVTELYTVQEDDKTVERK RSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLKADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPE VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLKLNVALNLSGTGDLSVVPGGRYSEMTLTSNWPHPSFLGDFLPAKR EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQR LHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSAD SALLLGTCVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDELRIWK >Mature_450_residues MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDVIRQSTSGPQKLVGPLIAIPVTELYTVQEDDKTVERK RSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLKADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPE VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLKLNVALNLSGTGDLSVVPGGRYSEMTLTSNWPHPSFLGDFLPAKR EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQR LHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSAD SALLLGTCVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDELRIWK
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=450, Percent_Identity=97.5555555555556, Blast_Score=852, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 49967; Mature: 49967
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDVIRQSTSGPQKLVGPLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHCCHH AIPVTELYTVQEDDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLK HCCHHHEEEECCCHHHHHHHHCEEEEECCCEEEECCCCCCCCCEEEEEECEEEECCEEEE ADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQG ECCCHHHHHHCCCCCEEECCCEEEEEECCCCCCCEEECCCCCCEEEEECCCCCCCCCCCE VHIPLPEGDWRKQNLKLNVALNLSGTGDLSVVPGGRYSEMTLTSNWPHPSFLGDFLPAKR EEEECCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCEEEEECCCCCHHHHHHHCCCHH EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAI HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH LLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSADSALLLGTCVLVVALAGMMFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TRNIDWYAFSLPKMKASKEVTMDDELRIWK HCCCCEEEEECCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDVIRQSTSGPQKLVGPLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHCCHH AIPVTELYTVQEDDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLK HCCHHHEEEECCCHHHHHHHHCEEEEECCCEEEECCCCCCCCCEEEEEECEEEECCEEEE ADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQG ECCCHHHHHHCCCCCEEECCCEEEEEECCCCCCCEEECCCCCCEEEEECCCCCCCCCCCE VHIPLPEGDWRKQNLKLNVALNLSGTGDLSVVPGGRYSEMTLTSNWPHPSFLGDFLPAKR EEEECCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCEEEEECCCCCHHHHHHHCCCHH EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAI HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH LLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSADSALLLGTCVLVVALAGMMFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TRNIDWYAFSLPKMKASKEVTMDDELRIWK HCCCCEEEEECCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]