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The map label for this gene is higB-2 [H]

Identifier: 218692779

GI number: 218692779

Start: 5195761

End: 5196171

Strand: Direct

Name: higB-2 [H]

Synonym: ECED1_5262

Alternate gene names: 218692779

Gene position: 5195761-5196171 (Clockwise)

Preceding gene: 218692778

Following gene: 218692780

Centisome position: 99.74

GC content: 41.12

Gene sequence:

>411_bases
ATGTTGAGTGGGATTACTGATTTAAAAGTGTACTTAGTACTCCATTTCGGTGTACAATGTACCCCCCAGGGAGGGGTAAT
GGGTAAGGCGATAATATTTATAGAGACGCCAATATTTACGCGTCAGATCAAGCAGATTGCAACCGATGATGAATTAAAGG
AATTACAAAAAGAACTCATCGGAACTCCCGATAAAGGTGATCTCATTCAGCAGACTGGTGGATTGCGTAAAGTCCGAATG
GCTGCGGGTTCACAGGGAAAAAGTGGCAGTGTCAGAATAATTTACTTTCTGGCGACGGAAGAGATTATTTATTTGATTAT
GGCCTATCCGAAAAATGCCAAAGATAGTCTGACAGATACGGAAAAAGCTCAACTAAAGAAGTTGACGAAACTGCTCAAAG
GCGAGATATAA

Upstream 100 bases:

>100_bases
TTCGTGCGGGTTGAAGAGGACGATTACGACAGCCGTTTCCTGCGCTGCGTGGAGCTGGTGCGGGAGATGATGGGGGAGCA
AAGATAATCATCTTTATAAG

Downstream 100 bases:

>100_bases
AATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAGAACCTGCACGGG
TGACCCGCTACGAAATTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLSGITDLKVYLVLHFGVQCTPQGGVMGKAIIFIETPIFTRQIKQIATDDELKELQKELIGTPDKGDLIQQTGGLRKVRM
AAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDTEKAQLKKLTKLLKGEI

Sequences:

>Translated_136_residues
MLSGITDLKVYLVLHFGVQCTPQGGVMGKAIIFIETPIFTRQIKQIATDDELKELQKELIGTPDKGDLIQQTGGLRKVRM
AAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDTEKAQLKKLTKLLKGEI
>Mature_136_residues
MLSGITDLKVYLVLHFGVQCTPQGGVMGKAIIFIETPIFTRQIKQIATDDELKELQKELIGTPDKGDLIQQTGGLRKVRM
AAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDTEKAQLKKLTKLLKGEI

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15027; Mature: 15027

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGITDLKVYLVLHFGVQCTPQGGVMGKAIIFIETPIFTRQIKQIATDDELKELQKELI
CCCCHHHHHHHHHEECCCEECCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHC
GTPDKGDLIQQTGGLRKVRMAAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDT
CCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCH
EKAQLKKLTKLLKGEI
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSGITDLKVYLVLHFGVQCTPQGGVMGKAIIFIETPIFTRQIKQIATDDELKELQKELI
CCCCHHHHHHHHHEECCCEECCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHC
GTPDKGDLIQQTGGLRKVRMAAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDT
CCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCH
EKAQLKKLTKLLKGEI
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]