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The map label for this gene is ytjB [H]

Identifier: 218692775

GI number: 218692775

Start: 5191345

End: 5191989

Strand: Reverse

Name: ytjB [H]

Synonym: ECED1_5258

Alternate gene names: 218692775

Gene position: 5191989-5191345 (Counterclockwise)

Preceding gene: 218692781

Following gene: 218692774

Centisome position: 99.66

GC content: 56.59

Gene sequence:

>645_bases
ATGGCTCGCACAAAACTGAAATTCCGGCTGCATCGGGCAGTGATTGTCCTGTTCTGTCTTGCCTTGTTAGTGGCGCTGAT
GCAGGGGGCGTCATGGTTTAGTCAAAACCACCAGCGACAGCGTAATCCGCAACTGGAAGAACTGGCCCGCACCCTGGCGC
GGCAGGTGACGCTAAACGTTGCACCGCTGATGCGTACCGACTCACCGGATGAAAAACGCATTCAGGCGATCCTCGATCAG
TTAACGGATGAAAGCCGCATTCTCGACGCAGGCGTATATGATGAGCAAGGCGATCTTATCGCCCGTTCTGGCGAAAGCGT
CGACGTGCGCGACCGGCTGGCGCTCGACGGCAAAAAAGCGGGCGGCTATTTTAACCAGCAGATTGTCGAACCCATTGCGG
GTAAAAACGGACCGCTCGGCTATCTGCGCCTGACGCTCGACACCCATACGCTCGCCACCGAAGCCCAACAGGTGGATAAC
ACCACTAACATTTTACGCCTGATGTTGCTGCTCTCGCTGGCAATCGGCGTAGTGCTGACCCGCACGCTGCTACAGGGTAA
ACGCACCCGCTGGCAGCAATCGCCCTTCCTGTTAACCGCCAGTAAACCGGTGCCGGAAGAGGAAGAAAGCGAGAAAAAAG
AGTGA

Upstream 100 bases:

>100_bases
CTCCTGTAAAATCGTTCGAAGCAGGGAAAATAACGCATGAGGCTACCTTGTATCCATTGCTTCTGGCAACATTAAGTCTC
AAATTTTCAAAGGGTGGAAG

Downstream 100 bases:

>100_bases
CCCATTACTACAAGAAAGGAAATCGTTATGTCCACATTACGCCTGCTCATCTCTGACTCTTACGACCCGTGGTTTAACCT
GGCGGTAGAGGAGTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQ
LTDESRILDAGVYDEQGDLIARSGESVDVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE

Sequences:

>Translated_214_residues
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQ
LTDESRILDAGVYDEQGDLIARSGESVDVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
>Mature_213_residues
ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQL
TDESRILDAGVYDEQGDLIARSGESVDVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNT
TNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family [H]

Homologues:

Organism=Escherichia coli, GI1790847, Length=214, Percent_Identity=99.5327102803738, Blast_Score=433, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019305 [H]

Pfam domain/function: PF10144 SMP_2 [H]

EC number: NA

Molecular weight: Translated: 24069; Mature: 23938

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVDVRDRLALDGKKA
HHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCC
GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT
CCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
HHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCC
>Mature Secondary Structure 
ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVDVRDRLALDGKKA
HHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCC
GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT
CCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
HHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]