| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218692530
Identifier: 218692530
GI number: 218692530
Start: 4940792
End: 4941640
Strand: Reverse
Name: 218692530
Synonym: ECED1_4984
Alternate gene names: NA
Gene position: 4941640-4940792 (Counterclockwise)
Preceding gene: 218692531
Following gene: 218692525
Centisome position: 94.86
GC content: 49.0
Gene sequence:
>849_bases ATGTCTGCAATCACAGTCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATCTGCTCCACCTCAGTCAGTCACAT TCTGGCTGTGCGAAAGACTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCGGTACTGACAGAAA GTATTGGAGGTAAAACTGCTCTGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTCATGGAGAAACCGGAA ACCGCAATGAAAGCCATCACCCGCAACCTTGACCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT AATGGATGCGCAGGCCCGTGATACATGGTACCACTCACTGGAGTACGATAACTTTCCGGAAATCAGTGAAGCGAACATTT GGAGCACATTTGAGCAACTGCACCAGAATAAGGATGAAGTGTTTGAGCGAGGAGTGATCAACGTCTTCAGAGGGCTGAGC TGGAATTACAAAACCAATTCCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACAGATGGGG ATTGCATCTTATCACCGGGCAACAGGCAGATCGACTCGCCGACCTGGAAAGAATGCTATACCTGTTCAGCGGCAAACCGA TCCCCGACAGCCGGGAAAATATCATCATTCGGCTGGATGATCACATCCGCTCCGTTCAGGGCAAAGTGTGCTATGAAGAT GAGATGTTCAACATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGATCGGCTAAA TGATATTATTGCGAAACATTATGCGGGAAAAGTATCTTCTTCAGTATAG
Upstream 100 bases:
>100_bases GCACCAGAACCGGTGAATCTCACTCACCAGACTTCATTCCACTGACGTCAGCCTGAACAGGGCTGGCGTTTTCATTTATC TGCGAAAAGGAATATCGATT
Downstream 100 bases:
>100_bases ACTTATATATCACAGGTATTGTGTCTCGTCCGGAACAAGACAGGTAGGTATGCTGCATTCACTGAACCATTACAGAGAAT ATTTCAACAGAGTTCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSAITVSRPEVVTGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISVLTESIGGKTALDWAMKQDFRCGCWLMEKPE TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYHSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLS WNYKTNSPCKFGSKIIVNNLVRWDRWGLHLITGQQADRLADLERMLYLFSGKPIPDSRENIIIRLDDHIRSVQGKVCYED EMFNIRYFKKGSAHITFRKPELVDRLNDIIAKHYAGKVSSSV
Sequences:
>Translated_282_residues MSAITVSRPEVVTGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISVLTESIGGKTALDWAMKQDFRCGCWLMEKPE TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYHSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLS WNYKTNSPCKFGSKIIVNNLVRWDRWGLHLITGQQADRLADLERMLYLFSGKPIPDSRENIIIRLDDHIRSVQGKVCYED EMFNIRYFKKGSAHITFRKPELVDRLNDIIAKHYAGKVSSSV >Mature_281_residues SAITVSRPEVVTGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISVLTESIGGKTALDWAMKQDFRCGCWLMEKPET AMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYHSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLSW NYKTNSPCKFGSKIIVNNLVRWDRWGLHLITGQQADRLADLERMLYLFSGKPIPDSRENIIIRLDDHIRSVQGKVCYEDE MFNIRYFKKGSAHITFRKPELVDRLNDIIAKHYAGKVSSSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32587; Mature: 32456
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAITVSRPEVVTGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISVLTESIGGKTA CCCEECCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYHSL HHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCC EYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLSWNYKTNSPCKFGSKIIVNNL CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHH VRWDRWGLHLITGQQADRLADLERMLYLFSGKPIPDSRENIIIRLDDHIRSVQGKVCYED HHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHCCCEEECC EMFNIRYFKKGSAHITFRKPELVDRLNDIIAKHYAGKVSSSV CCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHCHHCCCC >Mature Secondary Structure SAITVSRPEVVTGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISVLTESIGGKTA CCEECCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYHSL HHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCC EYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLSWNYKTNSPCKFGSKIIVNNL CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHH VRWDRWGLHLITGQQADRLADLERMLYLFSGKPIPDSRENIIIRLDDHIRSVQGKVCYED HHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHCCCEEECC EMFNIRYFKKGSAHITFRKPELVDRLNDIIAKHYAGKVSSSV CCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA