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The map label for this gene is yafX [H]

Identifier: 218692438

GI number: 218692438

Start: 4840956

End: 4841294

Strand: Reverse

Name: yafX [H]

Synonym: ECED1_4879

Alternate gene names: 218692438

Gene position: 4841294-4840956 (Counterclockwise)

Preceding gene: 218692439

Following gene: 218692437

Centisome position: 92.93

GC content: 56.93

Gene sequence:

>339_bases
GTGGGTGGCCCTGGAGCCCCGTGTTTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGT
ACACCCTGAACAACGGCGGGGCATTTATGGCCCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCA
TGAACGGCAACCGCGCTGAAATGAGCCCGGAAGCCGCTGGCATTGCTGCCTGTCTGATGACGTACAGTCATCACGCCTGT
CGTACGGAGTGTTATGCCATGACGGTCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCAT
TATGCGCATCATCGACTGA

Upstream 100 bases:

>100_bases
CCGCTGCATCAGGGAATGACCAGCCTCAGTTGGTTGCCACCATAGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAG
CATTTTGGCCTCATTCCACA

Downstream 100 bases:

>100_bases
ATGGAGGCAGGGACAATGCAGCAGCTTTCCTTTCTGCCCGGAGAAATGACGCCCGGCGAGCGCAGTCTCATTCTGCGGGC
TCTGAAAACCCTGGACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MGGPGAPCFRLDGPSVRRLLRWYLESVHPEQRRGIYGPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHAC
RTECYAMTVHYYRLRDYALQHPECSAIMRIID

Sequences:

>Translated_112_residues
MGGPGAPCFRLDGPSVRRLLRWYLESVHPEQRRGIYGPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHAC
RTECYAMTVHYYRLRDYALQHPECSAIMRIID
>Mature_111_residues
GGPGAPCFRLDGPSVRRLLRWYLESVHPEQRRGIYGPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACR
TECYAMTVHYYRLRDYALQHPECSAIMRIID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antirestriction protein family [H]

Homologues:

Organism=Escherichia coli, GI1786442, Length=73, Percent_Identity=73.972602739726, Blast_Score=118, Evalue=1e-28,
Organism=Escherichia coli, GI1788996, Length=73, Percent_Identity=78.0821917808219, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004914
- ProDom:   PD012854 [H]

Pfam domain/function: PF03230 Antirestrict [H]

EC number: NA

Molecular weight: Translated: 12809; Mature: 12677

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGPGAPCFRLDGPSVRRLLRWYLESVHPEQRRGIYGPEPDDDDDETWVLFNAMNGNRAE
CCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC
MSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
GGPGAPCFRLDGPSVRRLLRWYLESVHPEQRRGIYGPEPDDDDDETWVLFNAMNGNRAE
CCCCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC
MSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]