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The map label for this gene is yeeS [H]

Identifier: 218692437

GI number: 218692437

Start: 4840464

End: 4840910

Strand: Reverse

Name: yeeS [H]

Synonym: ECED1_4878

Alternate gene names: 218692437

Gene position: 4840910-4840464 (Counterclockwise)

Preceding gene: 218692438

Following gene: 218692436

Centisome position: 92.92

GC content: 58.17

Gene sequence:

>447_bases
ATGACGCCCGGCGAGCGCAGTCTCATTCTGCGGGCTCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGTGTGGCCTT
CACCTCCACCCGTGCGGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAGTTCCGGGTGCTGTATC
TGAATAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACCATCAACCGCACGGAAGTCCATCCCCGGGAA
GTGATTAAACGCGCCCTGTACCACAATGCCGCTGCCGTGGTACTGGCGCACAATCACCCGTCCGGTGAAGTCACACCCAG
TAAGGCAGACCGGCTTATCACCGAACGTCTGGTACAGGCACTGGGCCTGGTGGATATCCGGGTGCCGGACCATCTGATAG
TCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA

Upstream 100 bases:

>100_bases
GGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATCGACTGAATGGAGGCAGGGACAATGCAGCAGC
TTTCCTTTCTGCCCGGAGAA

Downstream 100 bases:

>100_bases
CCCGTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACTCGT
GGTGAAGCCATGCGTATTCA

Product: putative DNA repair protein; CP4-44 prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE
VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL

Sequences:

>Translated_148_residues
MTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE
VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
>Mature_147_residues
TPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV
IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788312, Length=148, Percent_Identity=99.3243243243243, Blast_Score=297, Evalue=2e-82,
Organism=Escherichia coli, GI2367100, Length=148, Percent_Identity=81.0810810810811, Blast_Score=249, Evalue=6e-68,
Organism=Escherichia coli, GI1788997, Length=140, Percent_Identity=77.8571428571429, Blast_Score=228, Evalue=9e-62,
Organism=Escherichia coli, GI87082300, Length=118, Percent_Identity=49.1525423728814, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 16542; Mature: 16411

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL
CCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCE
IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA
EECCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
LGLVDIRVPDHLIVGGNQVFSFAEHGLL
HCEEEEECCCEEEECCHHHHHHHHCCCC
>Mature Secondary Structure 
TPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL
CCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCE
IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA
EECCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
LGLVDIRVPDHLIVGGNQVFSFAEHGLL
HCEEEEECCCEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]