Click here to switch to the map view.

The map label for this gene is phnL [H]

Identifier: 218692393

GI number: 218692393

Start: 4794493

End: 4795173

Strand: Reverse

Name: phnL [H]

Synonym: ECED1_4831

Alternate gene names: 218692393

Gene position: 4795173-4794493 (Counterclockwise)

Preceding gene: 218692394

Following gene: 218692392

Centisome position: 92.05

GC content: 59.32

Gene sequence:

>681_bases
ATGATTAACGTACAAAACGTCAGTAAAACCTTCATCCTGCACCAGCAAAACGGCGTGCGCCTGCCTGTATTACAAGGCGC
CTCACTCACCGTCAACGCCGGCGAATGCGTGGTACTCCACGGCCATTCCGGCAGTGGAAAATCAACTCTGCTACGCTCGC
TGTATGCCAACTATCTACCCGACGAAGGGCAAATCCAGATCAAACACGGTGATGAATGGGTCGACCTGGTCACCGCGCCA
GCGCGCAAAGTGGTGGAGATCCGCAAAACCACTGTCGGCTGGGTAAGCCAGTTTCTGCGCGTCATCCCACGTATTTCGGC
ACTGGAAGTGGTGATGCAGCCGCTGCTCGATACCGGCGTACCGCGTGAAGCCTGCGCCGCTAAAGCCGCGCGTCTCCTCA
CCCACCTGAACGTGCCTGAACGCCTGTGGCACCTGGCACCATCGACCTTCTCCGGCGGCGAACAGCAGCGTGTCAACATC
GCCCGTGGCTTTATCGTCGACTACCCCATTCTGCTGCTCGACGAACCTACCGCCTCGCTGGACGCTAAAAACAGCGCCGC
CGTAGTGGAACTGATCCGCGAAGCCAAAGCCCGCGGCGCGGCCATCGTCGGTATCTTCCATGACGAAACCGTGCGCGAGC
AAGTCGCCGACCGCCTGCACCCAATGGGAGTCTCTTCATGA

Upstream 100 bases:

>100_bases
GATGCGGCGTAAACGCCTTATCCGGCCTACAAATGCGCTCCCCGTAGGTCGGATAAGACGCATCAGCGTCGCATCCGACA
CCCGAACCACGAGGCGAAAA

Downstream 100 bases:

>100_bases
TTATCAATAACGTCAAACTGGTGCTGGAAAACGAGGTGGTACACGGTTCTCTGGAGATGCAGGACGGCGAAATCCGCGCC
TTTGCCGAAAGCCAGAGTCA

Product: carbon-phosphorus lyase complex subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MINVQNVSKTFILHQQNGVRLPVLQGASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP
ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTHLNVPERLWHLAPSTFSGGEQQRVNI
ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKARGAAIVGIFHDETVREQVADRLHPMGVSS

Sequences:

>Translated_226_residues
MINVQNVSKTFILHQQNGVRLPVLQGASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP
ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTHLNVPERLWHLAPSTFSGGEQQRVNI
ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKARGAAIVGIFHDETVREQVADRLHPMGVSS
>Mature_226_residues
MINVQNVSKTFILHQQNGVRLPVLQGASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP
ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTHLNVPERLWHLAPSTFSGGEQQRVNI
ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKARGAAIVGIFHDETVREQVADRLHPMGVSS

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]

COG id: COG4778

COG function: function code P; ABC-type phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=223, Percent_Identity=26.0089686098655, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1790534, Length=226, Percent_Identity=96.4601769911504, Blast_Score=444, Evalue=1e-126,
Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=38.0090497737557, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI87081834, Length=220, Percent_Identity=32.7272727272727, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=34.5454545454545, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787105, Length=195, Percent_Identity=31.2820512820513, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786703, Length=194, Percent_Identity=36.5979381443299, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787089, Length=193, Percent_Identity=33.160621761658, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=31.0810810810811, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1789962, Length=196, Percent_Identity=29.5918367346939, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=29.6803652968037, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=31.5068493150685, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1789873, Length=208, Percent_Identity=29.3269230769231, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788644, Length=215, Percent_Identity=29.7674418604651, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1790544, Length=204, Percent_Identity=32.843137254902, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1789891, Length=202, Percent_Identity=31.1881188118812, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994997, Length=196, Percent_Identity=32.6530612244898, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081709, Length=218, Percent_Identity=31.1926605504587, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=32.8947368421053, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48995001, Length=226, Percent_Identity=27.4336283185841, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=31.2796208530806, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787759, Length=216, Percent_Identity=30.0925925925926, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787500, Length=204, Percent_Identity=25.9803921568627, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786872, Length=224, Percent_Identity=30.8035714285714, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789991, Length=229, Percent_Identity=26.6375545851528, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI87081791, Length=220, Percent_Identity=28.6363636363636, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693107, Length=231, Percent_Identity=26.4069264069264, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790190, Length=213, Percent_Identity=29.1079812206573, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=28.7671232876712, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788450, Length=210, Percent_Identity=30.952380952381, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788506, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI48994883, Length=230, Percent_Identity=25.6521739130435, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787712, Length=195, Percent_Identity=29.7435897435897, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87082267, Length=187, Percent_Identity=29.9465240641711, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790739, Length=208, Percent_Identity=25.9615384615385, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788210, Length=213, Percent_Identity=29.1079812206573, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788897, Length=194, Percent_Identity=30.9278350515464, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787758, Length=202, Percent_Identity=28.2178217821782, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=195, Percent_Identity=29.2307692307692, Blast_Score=62, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=221, Percent_Identity=28.5067873303167, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322640, Length=196, Percent_Identity=33.6734693877551, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17136662, Length=186, Percent_Identity=33.8709677419355, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24659289, Length=201, Percent_Identity=32.8358208955224, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR012701 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 24658; Mature: 24658

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVQNVSKTFILHQQNGVRLPVLQGASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP
CCCCCCCCEEEEEECCCCCEEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCC
DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGV
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PREACAAKAARLLTHLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL
CHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCC
DAKNSAAVVELIREAKARGAAIVGIFHDETVREQVADRLHPMGVSS
CCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MINVQNVSKTFILHQQNGVRLPVLQGASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP
CCCCCCCCEEEEEECCCCCEEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCC
DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGV
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PREACAAKAARLLTHLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL
CHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCC
DAKNSAAVVELIREAKARGAAIVGIFHDETVREQVADRLHPMGVSS
CCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]